From 3d3217ca4a929251a0e6253066eb8b08768eb0bc Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Fri, 10 Jul 2026 06:59:22 +0000 Subject: [PATCH] Bump the all-julia-packages group with 26 updates --- updated-dependencies: - dependency-name: Statistics dependency-version: 1.11.1 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: NonlinearSolve dependency-version: 4.20.2 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: ForwardDiff dependency-version: 1.4.1 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: Distributions dependency-version: 0.25.129 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: ComponentArrays dependency-version: 0.15.40 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: StatsPlots dependency-version: 0.15.8 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: SHA dependency-version: 0.7.0 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: Symbolics dependency-version: 7.31.0 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: Literate dependency-version: 2.21.0 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: PythonPlot dependency-version: 1.0.6 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: SimpleUnPack dependency-version: 1.1.0 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: LaTeXStrings dependency-version: 1.4.0 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: MarkdownTables dependency-version: 1.1.0 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: JSON dependency-version: 1.6.1 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: StatsBase dependency-version: 0.34.12 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: Tables dependency-version: 1.13.0 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: OrdinaryDiffEq dependency-version: 7.1.1 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: LsqFit dependency-version: 0.16.1 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: Plots dependency-version: 1.41.6 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: ModelingToolkit dependency-version: 11.31.0 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: PythonCall dependency-version: 0.9.35 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: DifferentialEquations dependency-version: 8.0.2 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: CurveFit dependency-version: 1.11.0 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: RecursiveArrayTools dependency-version: 4.3.2 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: SpecialFunctions dependency-version: 2.8.0 dependency-type: direct:production dependency-group: all-julia-packages - dependency-name: NaNMath dependency-version: 1.1.4 dependency-type: direct:production dependency-group: all-julia-packages ... Signed-off-by: dependabot[bot] --- Manifest.toml | 122 +++++++++++++++++++++++++------------------------- Project.toml | 28 ++++++++++++ 2 files changed, 89 insertions(+), 61 deletions(-) diff --git a/Manifest.toml b/Manifest.toml index e20065a..8337357 100644 --- a/Manifest.toml +++ b/Manifest.toml @@ -2,7 +2,7 @@ julia_version = "1.12.6" manifest_format = "2.0" -project_hash = "907be04a37c839cec04150ec924f39a99f6736d2" +project_hash = "cded11aaab667a585d0ef7aa8f36f3382ce3e593" [[deps.ADTypes]] git-tree-sha1 = "d9aaef7c63466eee4de23b4d9dad03629df54bea" @@ -414,9 +414,9 @@ version = "0.6.3" [[deps.CurveFit]] deps = ["ADTypes", "CommonSolve", "ConcreteStructs", "DifferentiationInterface", "Distributions", "FastRationals", "ForwardDiff", "InverseFunctions", "LinearAlgebra", "LinearSolve", "Markdown", "NonlinearSolveBase", "NonlinearSolveFirstOrder", "PrecompileTools", "RecursiveArrayTools", "SciMLBase", "Setfield", "StatsAPI"] -git-tree-sha1 = "4ca82ea578ed566f1c4f11ffc707b3f52886cee6" +git-tree-sha1 = "f624627f813cbe3334e7a677deb60241b09a6854" uuid = "5a033b19-8c74-5913-a970-47c3779ef25c" -version = "1.10.1" +version = "1.11.0" [[deps.DataAPI]] git-tree-sha1 = "abe83f3a2f1b857aac70ef8b269080af17764bbe" @@ -453,9 +453,9 @@ version = "1.9.1" [[deps.DiffEqBase]] deps = ["ArrayInterface", "BracketingNonlinearSolve", "ConcreteStructs", "DocStringExtensions", "FastBroadcast", "FastClosures", "FastPower", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLLogging", "SciMLOperators", "SciMLStructures", "Setfield", "StaticArraysCore", "SymbolicIndexingInterface", "TruncatedStacktraces"] -git-tree-sha1 = "e7ede77cd58352135cbf43eae0cd10c032a6ee48" +git-tree-sha1 = "3696ff4a00fe366e768ba6df61779ac6f5079c2d" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "7.6.0" +version = "7.6.1" [deps.DiffEqBase.extensions] DiffEqBaseCUDAExt = "CUDA" @@ -524,9 +524,9 @@ version = "8.0.2" [[deps.DifferentiationInterface]] deps = ["ADTypes", "LinearAlgebra"] -git-tree-sha1 = "2147a95a217cc8a78ec96ee03581adf129468e49" +git-tree-sha1 = "2348cf722e74ef177e165986c765b61217f7433a" uuid = "a0c0ee7d-e4b9-4e03-894e-1c5f64a51d63" -version = "0.7.18" +version = "0.7.19" [deps.DifferentiationInterface.extensions] DifferentiationInterfaceChainRulesCoreExt = "ChainRulesCore" @@ -673,9 +673,9 @@ version = "0.1.11" [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c307cd83373868391f3ac30b41530bc5d5d05d08" +git-tree-sha1 = "e6c4a6407a949e79a9d3f249bf49e6987c80e01f" uuid = "2e619515-83b5-522b-bb60-26c02a35a201" -version = "2.8.1+0" +version = "2.8.2+0" [[deps.ExprTools]] git-tree-sha1 = "27415f162e6028e81c72b82ef756bf321213b6ec" @@ -771,9 +771,9 @@ weakdeps = ["PDMats", "SparseArrays", "StaticArrays", "Statistics"] [[deps.FindFirstFunctions]] deps = ["PrecompileTools"] -git-tree-sha1 = "563bb87e9902f3adffe2568e2af6317d6675dbcd" +git-tree-sha1 = "e6e5cbf7e6f2e3c075f0aea1a43a61306a990c3d" uuid = "64ca27bc-2ba2-4a57-88aa-44e436879224" -version = "2.1.0" +version = "3.0.1" [[deps.FiniteDiff]] deps = ["ArrayInterface", "LinearAlgebra", "Setfield"] @@ -845,9 +845,9 @@ version = "1.1.3" [[deps.FunctionWrappersWrappers]] deps = ["FunctionWrappers", "PrecompileTools", "TruncatedStacktraces"] -git-tree-sha1 = "9760060160c6d7f642308eed67a40a1ffe3f028c" +git-tree-sha1 = "ffa0d00178e2004db4da70d96e17ee02e85e8966" uuid = "77dc65aa-8811-40c2-897b-53d922fa7daf" -version = "1.9.3" +version = "1.10.0" [deps.FunctionWrappersWrappers.extensions] FunctionWrappersWrappersEnzymeExt = ["Enzyme", "EnzymeCore"] @@ -1076,9 +1076,9 @@ version = "0.2.1" [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c0c9b76f3520863909825cbecdef58cd63de705a" +git-tree-sha1 = "1dae3057da6f2b9c857afef03177bbdc7c4afe92" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" -version = "3.1.5+0" +version = "3.2.0+0" [[deps.JuliaSyntaxHighlighting]] deps = ["StyledStrings"] @@ -1126,9 +1126,9 @@ version = "4.1.0+0" [[deps.LLVMOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "eb62a3deb62fc6d8822c0c4bef73e4412419c5d8" +git-tree-sha1 = "3ac157462e1e800777cc97d0eafd1bdb5356a470" uuid = "1d63c593-3942-5779-bab2-d838dc0a180e" -version = "18.1.8+0" +version = "21.1.8+0" [[deps.LaTeXStrings]] git-tree-sha1 = "dda21b8cbd6a6c40d9d02a73230f9d70fed6918c" @@ -1213,9 +1213,9 @@ version = "2.42.0+0" [[deps.Libtiff_jll]] deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "XZ_jll", "Zlib_jll", "Zstd_jll"] -git-tree-sha1 = "f04133fe05eff1667d2054c53d59f9122383fe05" +git-tree-sha1 = "aebd334d06cee9f24cea70bd19a39749daf73881" uuid = "89763e89-9b03-5906-acba-b20f662cd828" -version = "4.7.2+0" +version = "4.7.3+0" [[deps.Libuuid_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -1242,9 +1242,9 @@ version = "1.12.0" [[deps.LinearSolve]] deps = ["AMD", "ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "GPUArraysCore", "InteractiveUtils", "Krylov", "Libdl", "LinearAlgebra", "MKL_jll", "Markdown", "OpenBLAS_jll", "PrecompileTools", "Preferences", "PureKLU", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLLogging", "SciMLOperators", "Setfield", "SparseArrays", "SparseColumnPivotedQR", "StaticArraysCore"] -git-tree-sha1 = "ec49ed72f6024be2f9833fe630fbd72f6048f8ad" +git-tree-sha1 = "a4d32a4ec5bc98b5bf6512cf1d7d0abe10b6c5f8" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "3.87.0" +version = "4.2.0" [deps.LinearSolve.extensions] LinearSolveAMDGPUExt = "AMDGPU" @@ -1480,9 +1480,9 @@ version = "1.51.0" [[deps.ModelingToolkitTearing]] deps = ["BipartiteGraphs", "CommonSolve", "DocStringExtensions", "Graphs", "LinearAlgebra", "ModelingToolkitBase", "Moshi", "OffsetArrays", "OrderedCollections", "SciMLBase", "Setfield", "SparseArrays", "StateSelection", "SymbolicIndexingInterface", "SymbolicUtils", "Symbolics", "UUIDs"] -git-tree-sha1 = "40858de57e4ba155dfd7592cdea982ade0a25092" +git-tree-sha1 = "9040edd10d9db468eaecc2007663e1f6d754c74c" uuid = "6bb917b9-1269-42b9-9f7c-b0dca72083ab" -version = "1.18.0" +version = "1.18.2" [[deps.Moshi]] deps = ["ExproniconLite", "Jieko"] @@ -1546,9 +1546,9 @@ version = "1.3.0" [[deps.NonlinearSolve]] deps = ["ADTypes", "ArrayInterface", "BracketingNonlinearSolve", "CommonSolve", "ConcreteStructs", "DifferentiationInterface", "FastClosures", "FiniteDiff", "ForwardDiff", "LineSearch", "LinearAlgebra", "LinearSolve", "NonlinearSolveBase", "NonlinearSolveFirstOrder", "NonlinearSolveQuasiNewton", "NonlinearSolveSpectralMethods", "PrecompileTools", "Preferences", "Reexport", "SciMLBase", "Setfield", "SimpleNonlinearSolve", "StaticArraysCore", "SymbolicIndexingInterface"] -git-tree-sha1 = "997abb773470b8c0bc6f85e3bfe86ff437983121" +git-tree-sha1 = "fa84bceaa43cc91db844b4e869f50f53e2b797bc" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "4.20.1" +version = "4.20.2" [deps.NonlinearSolve.extensions] NonlinearSolveFastLevenbergMarquardtExt = "FastLevenbergMarquardt" @@ -1579,9 +1579,9 @@ version = "4.20.1" [[deps.NonlinearSolveBase]] deps = ["ADTypes", "Adapt", "ArrayInterface", "CommonSolve", "Compat", "ConcreteStructs", "DifferentiationInterface", "EnzymeCore", "FastClosures", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "LogExpFunctions", "Markdown", "MaybeInplace", "PreallocationTools", "PrecompileTools", "Preferences", "Printf", "RecursiveArrayTools", "SciMLBase", "SciMLJacobianOperators", "SciMLLogging", "SciMLOperators", "SciMLStructures", "Setfield", "StaticArraysCore", "SymbolicIndexingInterface", "TimerOutputs"] -git-tree-sha1 = "ed3b90b4c6265192f6dc5d7297d32a6766f74c2e" +git-tree-sha1 = "70e128636da33678ef4aa088e47e0c4ad7c86d92" uuid = "be0214bd-f91f-a760-ac4e-3421ce2b2da0" -version = "2.31.3" +version = "2.33.0" [deps.NonlinearSolveBase.extensions] NonlinearSolveBaseBandedMatricesExt = "BandedMatrices" @@ -1610,16 +1610,16 @@ version = "2.31.3" Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" [[deps.NonlinearSolveFirstOrder]] -deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConcreteStructs", "FiniteDiff", "ForwardDiff", "LineSearch", "LinearAlgebra", "LinearSolve", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase", "SciMLJacobianOperators", "Setfield", "StaticArraysCore"] -git-tree-sha1 = "2ec3c6ce945831db0ec689df143ea1190db75be9" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConcreteStructs", "FiniteDiff", "ForwardDiff", "LineSearch", "LinearAlgebra", "LinearSolve", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase", "SciMLJacobianOperators", "SciMLLogging", "Setfield", "StaticArraysCore"] +git-tree-sha1 = "94fc6df89c83ff62403f4e22d2db65960cd1914d" uuid = "5959db7a-ea39-4486-b5fe-2dd0bf03d60d" -version = "2.1.2" +version = "2.1.3" [[deps.NonlinearSolveQuasiNewton]] -deps = ["ArrayInterface", "CommonSolve", "ConcreteStructs", "LinearAlgebra", "LinearSolve", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase", "SciMLOperators", "StaticArraysCore"] -git-tree-sha1 = "06f9454f0dc432502c465d87dbc20fc64e2192ea" +deps = ["ArrayInterface", "CommonSolve", "ConcreteStructs", "LinearAlgebra", "LinearSolve", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase", "SciMLLogging", "SciMLOperators", "StaticArraysCore"] +git-tree-sha1 = "7a6137308a5876fd0a72b2455eeb9a68bbaf09ad" uuid = "9a2c21bd-3a47-402d-9113-8faf9a0ee114" -version = "1.13.2" +version = "1.13.3" weakdeps = ["ForwardDiff"] [deps.NonlinearSolveQuasiNewton.extensions] @@ -1701,15 +1701,15 @@ version = "7.1.1" [[deps.OrdinaryDiffEqBDF]] deps = ["ADTypes", "ArrayInterface", "DiffEqBase", "FastBroadcast", "LinearAlgebra", "MacroTools", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "OrdinaryDiffEqSDIRK", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "TruncatedStacktraces"] -git-tree-sha1 = "c6d476e2017e85b988725c3040007f9fd730f271" +git-tree-sha1 = "3d207d6282e905e1875d98d343bef54781129164" uuid = "6ad6398a-0878-4a85-9266-38940aa047c8" -version = "2.2.2" +version = "2.3.0" [[deps.OrdinaryDiffEqCore]] -deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "BinaryHeaps", "ConcreteStructs", "DataStructures", "DiffEqBase", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "FastPower", "FunctionWrappers", "FunctionWrappersWrappers", "InteractiveUtils", "LinearAlgebra", "Logging", "MacroTools", "MuladdMacro", "PrecompileTools", "Preferences", "Random", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLLogging", "SciMLOperators", "SciMLStructures", "SymbolicIndexingInterface", "TruncatedStacktraces"] -git-tree-sha1 = "a0618efce537f613bc0c8e431d80a1e2b74fdfea" +deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "BinaryHeaps", "CommonSolve", "DiffEqBase", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "FastPower", "FunctionWrappers", "FunctionWrappersWrappers", "InteractiveUtils", "LinearAlgebra", "Logging", "MacroTools", "MuladdMacro", "PrecompileTools", "Preferences", "Random", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLLogging", "SciMLOperators", "SciMLStructures", "SymbolicIndexingInterface", "TruncatedStacktraces"] +git-tree-sha1 = "c4035f06d7749c49347d8a200d3ba0a17085492e" uuid = "bbf590c4-e513-4bbe-9b18-05decba2e5d8" -version = "4.5.0" +version = "4.6.0" [deps.OrdinaryDiffEqCore.extensions] OrdinaryDiffEqCoreMooncakeExt = "Mooncake" @@ -1723,36 +1723,36 @@ version = "4.5.0" [[deps.OrdinaryDiffEqDefault]] deps = ["ADTypes", "DiffEqBase", "EnumX", "LinearAlgebra", "LinearSolve", "OrdinaryDiffEqBDF", "OrdinaryDiffEqCore", "OrdinaryDiffEqRosenbrock", "OrdinaryDiffEqTsit5", "OrdinaryDiffEqVerner", "PrecompileTools", "Preferences", "Reexport", "SciMLBase"] -git-tree-sha1 = "ab5287822a6ccc4d5cafcad9306f0d375799aefb" +git-tree-sha1 = "10156c4e4162e9aaba2214b52dfe8621d66cb590" uuid = "50262376-6c5a-4cf5-baba-aaf4f84d72d7" -version = "2.2.1" +version = "2.2.2" [[deps.OrdinaryDiffEqDifferentiation]] deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "ConstructionBase", "DiffEqBase", "DifferentiationInterface", "FastBroadcast", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "OrdinaryDiffEqCore", "SciMLBase", "SciMLOperators", "SparseMatrixColorings", "StaticArraysCore"] -git-tree-sha1 = "85de234acae825f50332426f310edc71e8049878" +git-tree-sha1 = "d9c555750fc4cf0283515536d04e6522b2d0b76f" uuid = "4302a76b-040a-498a-8c04-15b101fed76b" -version = "3.2.1" +version = "3.2.3" weakdeps = ["SparseArrays"] [deps.OrdinaryDiffEqDifferentiation.extensions] OrdinaryDiffEqDifferentiationSparseArraysExt = "SparseArrays" [[deps.OrdinaryDiffEqNonlinearSolve]] -deps = ["ADTypes", "ArrayInterface", "DiffEqBase", "FastBroadcast", "FastClosures", "ForwardDiff", "LinearAlgebra", "LinearSolve", "MuladdMacro", "NonlinearSolve", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "PreallocationTools", "RecursiveArrayTools", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleNonlinearSolve", "SparseArrays", "StaticArraysCore"] -git-tree-sha1 = "66836dfee82c4f2749ee0a73900d5f9feec14728" +deps = ["ADTypes", "ArrayInterface", "ConstructionBase", "DiffEqBase", "FastBroadcast", "FastClosures", "ForwardDiff", "LinearAlgebra", "LinearSolve", "MuladdMacro", "NonlinearSolve", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "PreallocationTools", "RecursiveArrayTools", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SparseArrays", "StaticArraysCore"] +git-tree-sha1 = "d91bbb8a5baa7d4d3e8f998fcad3fe8562982255" uuid = "127b3ac7-2247-4354-8eb6-78cf4e7c58e8" -version = "2.0.1" +version = "2.1.0" [[deps.OrdinaryDiffEqRosenbrock]] deps = ["ADTypes", "DiffEqBase", "DifferentiationInterface", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "MacroTools", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqRosenbrockTableaus", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase"] -git-tree-sha1 = "6948601ee55329ab22e29bd9bba78fb76ee2da57" +git-tree-sha1 = "5415ad34584fa4394bc6fb27eefa53dbe65a209a" uuid = "43230ef6-c299-4910-a778-202eb28ce4ce" -version = "2.3.1" +version = "2.4.0" [[deps.OrdinaryDiffEqRosenbrockTableaus]] -git-tree-sha1 = "945e5126348328447e0f6582c0b299b8661ed557" +git-tree-sha1 = "c0adc33245d5717c874963897e86606776de1b71" uuid = "b4bd8bb3-f80f-41d2-9b21-73a655b304b9" -version = "2.1.1" +version = "2.2.0" [[deps.OrdinaryDiffEqSDIRK]] deps = ["ADTypes", "DiffEqBase", "FastBroadcast", "LinearAlgebra", "MacroTools", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "TruncatedStacktraces"] @@ -2088,9 +2088,9 @@ version = "0.5.1+0" [[deps.Roots]] deps = ["Accessors", "CommonSolve", "Printf"] -git-tree-sha1 = "ed45bcc7cf3c8887595b973f2b1efbe91dcc50ec" +git-tree-sha1 = "46d2af536e1afe8f04cf31a59298adadf96e99e6" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "3.0.1" +version = "3.0.2" [deps.Roots.extensions] RootsChainRulesCoreExt = "ChainRulesCore" @@ -2130,9 +2130,9 @@ version = "0.7.0" [[deps.SciMLBase]] deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PreallocationTools", "PrecompileTools", "Preferences", "Printf", "Random", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLLogging", "SciMLOperators", "SciMLPublic", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"] -git-tree-sha1 = "a4a3caa5612dcd4ff0925a98b3820654c663cd9c" +git-tree-sha1 = "efe313cd6ec7ec80301c889b21734ba6b062f9ee" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "3.31.0" +version = "3.33.0" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -2195,9 +2195,9 @@ version = "2.0.1" [[deps.SciMLOperators]] deps = ["Accessors", "Adapt", "ArrayInterface", "DocStringExtensions", "LinearAlgebra"] -git-tree-sha1 = "da2b6aeedd65761a5a8bb6667acfb9c22069bee6" +git-tree-sha1 = "54ac780e1be8c12ad39295b5d4dfd4b1af3685ba" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "1.23.0" +version = "1.24.0" [deps.SciMLOperators.extensions] SciMLOperatorsLoopVectorizationExt = "LoopVectorization" @@ -2361,9 +2361,9 @@ version = "0.1.0" [[deps.StateSelection]] deps = ["BipartiteGraphs", "DocStringExtensions", "FindFirstFunctions", "Graphs", "LinearAlgebra", "OrderedCollections", "Setfield", "SparseArrays"] -git-tree-sha1 = "3370d1327d012dd9cb8917feff7a78b7ff984a49" +git-tree-sha1 = "461bd8c5dd8f6b036cdc0b95726d7fcc50b634fb" uuid = "64909d44-ed92-46a8-bbd9-f047dfbdc84b" -version = "1.10.2" +version = "1.11.0" [deps.StateSelection.extensions] StateSelectionDeepDiffsExt = "DeepDiffs" @@ -2492,9 +2492,9 @@ version = "1.1.1" [[deps.SymbolicUtils]] deps = ["AbstractTrees", "ArrayInterface", "Combinatorics", "ConstructionBase", "DataStructures", "DocStringExtensions", "DynamicPolynomials", "EnumX", "ExproniconLite", "Graphs", "LinearAlgebra", "MacroTools", "Moshi", "MultivariatePolynomials", "MutableArithmetics", "NaNMath", "PrecompileTools", "ReadOnlyArrays", "SciMLPublic", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArraysCore", "SymbolicIndexingInterface", "TaskLocalValues", "TermInterface", "WeakCacheSets"] -git-tree-sha1 = "80779cd2ed8292ee98f2ca6c47768882a3abcea1" +git-tree-sha1 = "30545854200ddaedbd22ac5659fa8a63fbbcbc08" uuid = "d1185830-fcd6-423d-90d6-eec64667417b" -version = "4.38.1" +version = "4.39.0" [deps.SymbolicUtils.extensions] SymbolicUtilsChainRulesCoreExt = "ChainRulesCore" @@ -2510,9 +2510,9 @@ version = "4.38.1" [[deps.Symbolics]] deps = ["ADTypes", "AbstractPlutoDingetjes", "ArrayInterface", "Bijections", "CommonWorldInvalidations", "ConstructionBase", "DataStructures", "DiffRules", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "Moshi", "MultivariatePolynomials", "MutableArithmetics", "NaNMath", "PrecompileTools", "Preferences", "Primes", "RecipesBase", "Reexport", "RuntimeGeneratedFunctions", "SciMLPublic", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArraysCore", "SymbolicIndexingInterface", "SymbolicLimits", "SymbolicUtils", "TermInterface"] -git-tree-sha1 = "acec255ab714edc8f358bcd5443b52c7111969cc" +git-tree-sha1 = "d88ebb64e6a3749a90e6bc1646903b67362655c1" uuid = "0c5d862f-8b57-4792-8d23-62f2024744c7" -version = "7.30.0" +version = "7.31.0" [deps.Symbolics.extensions] SymbolicsD3TreesExt = "D3Trees" diff --git a/Project.toml b/Project.toml index 333b9ec..4453b7d 100644 --- a/Project.toml +++ b/Project.toml @@ -32,3 +32,31 @@ StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" StatsPlots = "f3b207a7-027a-5e70-b257-86293d7955fd" Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7" Tables = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" + +[compat] +ComponentArrays = "0.15.40" +CurveFit = "1.11.0" +DifferentialEquations = "8.0.2" +Distributions = "0.25.129" +ForwardDiff = "1.4.1" +JSON = "1.6.1" +LaTeXStrings = "1.4.0" +Literate = "2.21.0" +LsqFit = "0.16.1" +MarkdownTables = "1.1.0" +ModelingToolkit = "11.31.0" +NaNMath = "1.1.4" +NonlinearSolve = "4.20.2" +OrdinaryDiffEq = "7.1.1" +Plots = "1.41.6" +PythonCall = "0.9.35" +PythonPlot = "1.0.6" +RecursiveArrayTools = "4.3.2" +SHA = "0.7.0" +SimpleUnPack = "1.1.0" +SpecialFunctions = "2.8.0" +Statistics = "1.11.1" +StatsBase = "0.34.12" +StatsPlots = "0.15.8" +Symbolics = "7.31.0" +Tables = "1.13.0"