Update snippy rule to copy the contents of the snippy folder into the isolate parent directory or to save output in isolate parent directory. This is needed when running snippy-core and snp-dists the names of the isolate folders are used to name the sequences.
Update snippy rule to copy the contents of the snippy folder into the isolate parent directory or to save output in isolate parent directory. This is needed when running
snippy-coreandsnp-diststhe names of the isolate folders are used to name the sequences.