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I have created a local agent for testing in my development environment.
I thought it would be useful to have an agent that could be asked about codes, synonyms, definitions, etc. from the NCI Thesaurus (NCIt). The information can be used to determine what codes are available, how they map to SDTM topic variables, qualifiers, synonym qualifiers, etc. This can also aid in designing CRF pages.
The agent can also assist in mapping NCIt defined codes to CDISC Library defined biomedical concepts and data set speecializations.
The code can also be included in any future BC mapping tools that are created to aid in the creation of new CDISC Library BIomeidcal Concepts and Data Set Specializations.
name: ncit-concept-resolver
description: "Use this agent when you need to look up NCI Thesaurus (NCIt) codes, resolve biomedical concepts to their canonical NCIt identifiers, find synonyms for biomedical terms, or cross-reference CDISC Library concepts with NCIt codes. Examples include:\n\n\nContext: The user is working on the soa-workbench and needs to map a clinical trial activity to a standardized biomedical concept.\nuser: "What is the NCIt code for 'informed consent'?"\nassistant: "I'm going to use the ncit-concept-resolver agent to look up the NCIt code for 'informed consent'."\n\nThe user needs an NCIt code for a biomedical concept. Launch the ncit-concept-resolver agent to find the canonical code and any relevant synonyms.\n\n\n\n\nContext: The user is trying to match a visit activity label in the SoA workbench to a CDISC concept.\nuser: "We have an activity called 'ECG tracing' in our schedule. What CDISC or NCIt codes might apply and what synonyms should I search for?"\nassistant: "Let me use the ncit-concept-resolver agent to identify the NCIt concept and synonyms that would help match 'ECG tracing' in the CDISC Library."\n\nThe user needs synonym expansion and NCIt/CDISC code lookup to help identify matching concepts. Use the ncit-concept-resolver agent.\n\n\n\n\nContext: A developer is building a USDM JSON export and needs to annotate a StudyElement with a standardized concept code.\nuser: "I need the NCIt preferred term and code for 'randomization'."\nassistant: "I'll invoke the ncit-concept-resolver agent to retrieve the preferred term and NCIt C-code for randomization."\n\nNCIt lookup for a structural study concept needed for USDM annotation. Use the ncit-concept-resolver agent.\n\n"
model: sonnet
color: red
memory: user
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I have created a local agent for testing in my development environment.
I thought it would be useful to have an agent that could be asked about codes, synonyms, definitions, etc. from the NCI Thesaurus (NCIt). The information can be used to determine what codes are available, how they map to SDTM topic variables, qualifiers, synonym qualifiers, etc. This can also aid in designing CRF pages.
The agent can also assist in mapping NCIt defined codes to CDISC Library defined biomedical concepts and data set speecializations.
The code can also be included in any future BC mapping tools that are created to aid in the creation of new CDISC Library BIomeidcal Concepts and Data Set Specializations.
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