From ee824a7057c50e09471764b8422a884fc0841082 Mon Sep 17 00:00:00 2001 From: "google-labs-jules[bot]" <161369871+google-labs-jules[bot]@users.noreply.github.com> Date: Fri, 28 Nov 2025 20:30:38 +0000 Subject: [PATCH 1/7] feat: add file browser and download capability to UI - Added backend endpoints in `api_server.py` for listing, reading, and downloading files. - Added `ArtifactsBrowser` component in frontend to navigate and view local files. - Integrated "Files" button in `LabNotebook` to access the file browser. - Verified backend with Python tests and frontend with Playwright. --- __pycache__/api_server.cpython-312.pyc | Bin 0 -> 36911 bytes __pycache__/insights.cpython-312.pyc | Bin 0 -> 6745 bytes api_server.py | 130 +++++++++- backend.log | 15 ++ frontend.log | 11 + frontend/package-lock.json | 18 +- .../components/Artifacts/ArtifactsBrowser.tsx | 229 ++++++++++++++++++ frontend/src/components/LabNotebook.tsx | 43 +++- frontend/src/lib/api.ts | 37 +++ 9 files changed, 471 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z%=-EW^U)atp@%6#k8}e4yKV+1K->jxgao}w2l!u3EG3P7M$JKe=^^pvwJ~sG-AP*hjW5GZ`wFLt63G$K#0y20P zBu|hZcznU#mjYnb1c3y2UBJlDMY1(ANzKS4O{kheu^423i+NW^vEtXZUwkvH;OH+E zUB4v|An^q(be>Gt(z#WEz`is)bdh(c_$(2x_iLo3po$qZ%LqJAiHLAk7NLv0au^a5 z2n>OuzA%_5dT?N|3Zy_K<%Gen^ziktj$>~IHjER(6R}v yr2ELSIb-d}p~Fv2R;u=Cql0QMwBMj8civS~pb7D*v$Mbu0*0GBduBpvJNiF AgentSummaryResponse: return AgentSummaryResponse(**result) +@app.get("/api/files/list", summary="List files in a directory") +def list_files(path: str = ".") -> List[Dict[str, Any]]: + """ + List files and directories in the given path relative to the project root. + """ + # Security check: ensure path resolves to inside BASE_DIR + # We strip any leading slashes/dots to prevent traversing up from root initially + clean_path = path.strip("/") + if clean_path == "." or clean_path == "": + target_path = BASE_DIR + else: + target_path = (BASE_DIR / clean_path).resolve() + + if not str(target_path).startswith(str(BASE_DIR)): + raise HTTPException(status_code=403, detail="Access denied: Cannot traverse outside project root.") + + if not target_path.exists(): + raise HTTPException(status_code=404, detail="Path not found.") + + if not target_path.is_dir(): + raise HTTPException(status_code=400, detail="Path is not a directory.") + + results = [] + try: + for item in target_path.iterdir(): + # Skip hidden files/dirs and .git, and __pycache__ + if item.name.startswith(".") or item.name == "__pycache__": + continue + + stats = item.stat() + results.append({ + "name": item.name, + "path": str(item.relative_to(BASE_DIR)).replace("\\", "/"), + "type": "directory" if item.is_dir() else "file", + "size": stats.st_size, + "modified": datetime.fromtimestamp(stats.st_mtime, timezone.utc).isoformat(), + }) + except PermissionError: + raise HTTPException(status_code=403, detail="Permission denied.") + + # Sort: directories first, then files + results.sort(key=lambda x: (x["type"] != "directory", x["name"].lower())) + return results + + +@app.get("/api/files/read", summary="Read a file content") +def read_file(path: str) -> Dict[str, str]: + """ + Read the content of a text file. + """ + clean_path = path.strip("/") + target_path = (BASE_DIR / clean_path).resolve() + + if not str(target_path).startswith(str(BASE_DIR)): + raise HTTPException(status_code=403, detail="Access denied.") + + if not target_path.exists() or not target_path.is_file(): + raise HTTPException(status_code=404, detail="File not found.") + + try: + content = target_path.read_text(encoding="utf-8") + return {"content": content} + except UnicodeDecodeError: + raise HTTPException(status_code=400, detail="Binary file not supported for text view.") + except Exception as e: + raise HTTPException(status_code=500, detail=str(e)) + + +@app.get("/api/files/download", summary="Download a file") +def download_file(path: str): + """ + Download a single file. + """ + clean_path = path.strip("/") + target_path = (BASE_DIR / clean_path).resolve() + + if not str(target_path).startswith(str(BASE_DIR)): + raise HTTPException(status_code=403, detail="Access denied.") + + if not target_path.exists() or not target_path.is_file(): + raise HTTPException(status_code=404, detail="File not found.") + + return FileResponse(target_path, filename=target_path.name) + + +@app.get("/api/files/download_zip", summary="Download directory as zip") +def download_zip(path: str = "."): + """ + Download a directory as a zip file. + """ + clean_path = path.strip("/") + if clean_path == "." or clean_path == "": + target_path = BASE_DIR + else: + target_path = (BASE_DIR / clean_path).resolve() + + if not str(target_path).startswith(str(BASE_DIR)): + raise HTTPException(status_code=403, detail="Access denied.") + + if not target_path.exists() or not target_path.is_dir(): + raise HTTPException(status_code=404, detail="Directory not found.") + + # Create a zip file in memory + import io + import zipfile + + zip_buffer = io.BytesIO() + with zipfile.ZipFile(zip_buffer, "w", zipfile.ZIP_DEFLATED) as zip_file: + for root, dirs, files in os.walk(target_path): + # exclude hidden folders + dirs[:] = [d for d in dirs if not d.startswith(".") and d != "__pycache__" and d != "node_modules"] + + for file in files: + if file.startswith("."): + continue + file_path = Path(root) / file + arcname = file_path.relative_to(target_path) + zip_file.write(file_path, arcname) + + zip_buffer.seek(0) + filename = target_path.name if (path != "." and path != "") else "project" + return StreamingResponse( + zip_buffer, + media_type="application/zip", + headers={"Content-Disposition": f"attachment; filename={filename}.zip"} + ) + + # --------------------------------------------------------------------------- # Static file serving for production (Railway, etc.) # --------------------------------------------------------------------------- diff --git a/backend.log b/backend.log new file mode 100644 index 0000000..afb100b --- /dev/null +++ b/backend.log @@ -0,0 +1,15 @@ +INFO: Will watch for changes in these directories: ['/app'] +INFO: Uvicorn running on http://0.0.0.0:8000 (Press CTRL+C to quit) +INFO: Started reloader process [7049] using StatReload +INFO: Started server process [7196] +INFO: Waiting for application startup. +INFO: Application startup complete. +INFO: 127.0.0.1:35952 - "GET /api/health HTTP/1.1" 200 OK +INFO: 127.0.0.1:35954 - "GET /api/credentials/status HTTP/1.1" 200 OK +INFO: 127.0.0.1:35964 - "GET /api/credentials/status HTTP/1.1" 200 OK +INFO: 127.0.0.1:35964 - "GET /api/files/list?path=. HTTP/1.1" 200 OK +INFO: Shutting down +INFO: Waiting for application shutdown. +INFO: Application shutdown complete. +INFO: Finished server process [7196] +INFO: Stopping reloader process [7049] diff --git a/frontend.log b/frontend.log new file mode 100644 index 0000000..ee1435a --- /dev/null +++ b/frontend.log @@ -0,0 +1,11 @@ + +> frontend@0.0.0 dev +> vite + +Port 5173 is in use, trying another one... +Port 5174 is in use, trying another one... + + VITE v7.2.4 ready in 262 ms + + ➜ Local: http://localhost:5175/ + ➜ Network: use --host to expose diff --git a/frontend/package-lock.json b/frontend/package-lock.json index 8ecd8e7..cbea246 100644 --- a/frontend/package-lock.json +++ b/frontend/package-lock.json @@ -82,6 +82,7 @@ "integrity": "sha512-e7jT4DxYvIDLk1ZHmU/m/mB19rex9sv0c2ftBtjSBv+kVM/902eh0fINUzD7UwLLNR+jU585GxUJ8/EBfAM5fw==", "dev": true, "license": "MIT", + "peer": true, "dependencies": { "@babel/code-frame": "^7.27.1", "@babel/generator": "^7.28.5", @@ -1777,6 +1778,7 @@ "integrity": "sha512-GNWcUTRBgIRJD5zj+Tq0fKOJ5XZajIiBroOF0yvj2bSU1WvNdYS/dn9UxwsujGW4JX06dnHyjV2y9rRaybH0iQ==", "dev": true, "license": "MIT", + "peer": true, "dependencies": { "undici-types": "~7.16.0" } @@ -1786,6 +1788,7 @@ "resolved": "https://registry.npmjs.org/@types/react/-/react-19.2.6.tgz", "integrity": "sha512-p/jUvulfgU7oKtj6Xpk8cA2Y1xKTtICGpJYeJXz2YVO2UcvjQgeRMLDGfDeqeRW2Ta+0QNFwcc8X3GH8SxZz6w==", "license": "MIT", + "peer": true, "dependencies": { "csstype": "^3.2.2" } @@ -1852,6 +1855,7 @@ "integrity": "sha512-lJi3PfxVmo0AkEY93ecfN+r8SofEqZNGByvHAI3GBLrvt1Cw6H5k1IM02nSzu0RfUafr2EvFSw0wAsZgubNplQ==", "dev": true, "license": "MIT", + "peer": true, "dependencies": { "@typescript-eslint/scope-manager": "8.47.0", "@typescript-eslint/types": "8.47.0", @@ -2110,6 +2114,7 @@ "integrity": "sha512-NZyJarBfL7nWwIq+FDL6Zp/yHEhePMNnnJ0y3qfieCrmNvYct8uvtiV41UvlSe6apAfk0fY1FbWx+NwfmpvtTg==", "dev": true, "license": "MIT", + "peer": true, "bin": { "acorn": "bin/acorn" }, @@ -2276,6 +2281,7 @@ } ], "license": "MIT", + "peer": true, "dependencies": { "baseline-browser-mapping": "^2.8.25", "caniuse-lite": "^1.0.30001754", @@ -2646,6 +2652,7 @@ "integrity": "sha512-BhHmn2yNOFA9H9JmmIVKJmd288g9hrVRDkdoIgRCRuSySRUHH7r/DI6aAXW9T1WwUuY3DFgrcaqB+deURBLR5g==", "dev": true, "license": "MIT", + "peer": true, "dependencies": { "@eslint-community/eslint-utils": "^4.8.0", "@eslint-community/regexpp": "^4.12.1", @@ -4815,6 +4822,7 @@ } ], "license": "MIT", + "peer": true, "dependencies": { "nanoid": "^3.3.11", "picocolors": "^1.1.1", @@ -4901,6 +4909,7 @@ "resolved": "https://registry.npmjs.org/react/-/react-19.2.0.tgz", "integrity": "sha512-tmbWg6W31tQLeB5cdIBOicJDJRR2KzXsV7uSK9iNfLWQ5bIZfxuPEHp7M8wiHyHnn0DD1i7w3Zmin0FtkrwoCQ==", "license": "MIT", + "peer": true, "engines": { "node": ">=0.10.0" } @@ -4910,6 +4919,7 @@ "resolved": "https://registry.npmjs.org/react-dom/-/react-dom-19.2.0.tgz", "integrity": "sha512-UlbRu4cAiGaIewkPyiRGJk0imDN2T3JjieT6spoL2UeSf5od4n5LB/mQ4ejmxhCFT1tYe8IvaFulzynWovsEFQ==", "license": "MIT", + "peer": true, "dependencies": { "scheduler": "^0.27.0" }, @@ -5239,7 +5249,8 @@ "resolved": "https://registry.npmjs.org/tailwindcss/-/tailwindcss-4.1.17.tgz", "integrity": "sha512-j9Ee2YjuQqYT9bbRTfTZht9W/ytp5H+jJpZKiYdP/bpnXARAuELt9ofP0lPnmHjbga7SNQIxdTAXCmtKVYjN+Q==", "dev": true, - "license": "MIT" + "license": "MIT", + "peer": true }, "node_modules/tapable": { "version": "2.3.0", @@ -5296,6 +5307,7 @@ "integrity": "sha512-5gTmgEY/sqK6gFXLIsQNH19lWb4ebPDLA4SdLP7dsWkIXHWlG66oPuVvXSGFPppYZz8ZDZq0dYYrbHfBCVUb1Q==", "dev": true, "license": "MIT", + "peer": true, "engines": { "node": ">=12" }, @@ -5374,6 +5386,7 @@ "integrity": "sha512-jl1vZzPDinLr9eUt3J/t7V6FgNEw9QjvBPdysz9KfQDD41fQrC2Y4vKQdiaUpFT4bXlb1RHhLpp8wtm6M5TgSw==", "dev": true, "license": "Apache-2.0", + "peer": true, "bin": { "tsc": "bin/tsc", "tsserver": "bin/tsserver" @@ -5582,6 +5595,7 @@ "integrity": "sha512-NL8jTlbo0Tn4dUEXEsUg8KeyG/Lkmc4Fnzb8JXN/Ykm9G4HNImjtABMJgkQoVjOBN/j2WAwDTRytdqJbZsah7w==", "dev": true, "license": "MIT", + "peer": true, "dependencies": { "esbuild": "^0.25.0", "fdir": "^6.5.0", @@ -5675,6 +5689,7 @@ "integrity": "sha512-5gTmgEY/sqK6gFXLIsQNH19lWb4ebPDLA4SdLP7dsWkIXHWlG66oPuVvXSGFPppYZz8ZDZq0dYYrbHfBCVUb1Q==", "dev": true, "license": "MIT", + "peer": true, "engines": { "node": ">=12" }, @@ -5734,6 +5749,7 @@ "integrity": "sha512-JInaHOamG8pt5+Ey8kGmdcAcg3OL9reK8ltczgHTAwNhMys/6ThXHityHxVV2p3fkw/c+MAvBHFVYHFZDmjMCQ==", "dev": true, "license": "MIT", + "peer": true, "funding": { "url": "https://github.com/sponsors/colinhacks" } diff --git a/frontend/src/components/Artifacts/ArtifactsBrowser.tsx b/frontend/src/components/Artifacts/ArtifactsBrowser.tsx new file mode 100644 index 0000000..977cc02 --- /dev/null +++ b/frontend/src/components/Artifacts/ArtifactsBrowser.tsx @@ -0,0 +1,229 @@ +import { useState, useEffect } from "react"; +import { X, Loader2, FileText, Folder, Image, Download, ChevronRight, Home, ArrowUp } from "lucide-react"; +import { FileItem, listFiles, readFile, getDownloadUrl, getZipDownloadUrl } from "@/lib/api"; +import { cn } from "@/lib/utils"; + +interface ArtifactsBrowserProps { + isOpen: boolean; + onClose: () => void; +} + +export function ArtifactsBrowser({ isOpen, onClose }: ArtifactsBrowserProps) { + const [currentPath, setCurrentPath] = useState("."); + const [files, setFiles] = useState([]); + const [loading, setLoading] = useState(false); + const [error, setError] = useState(null); + const [selectedFile, setSelectedFile] = useState(null); + const [fileContent, setFileContent] = useState(null); + const [loadingContent, setLoadingContent] = useState(false); + + useEffect(() => { + if (isOpen) { + loadFiles(currentPath); + } + }, [isOpen, currentPath]); + + const loadFiles = async (path: string) => { + setLoading(true); + setError(null); + try { + const data = await listFiles(path); + setFiles(data); + } catch (err) { + setError(err instanceof Error ? err.message : "Failed to load files"); + } finally { + setLoading(false); + } + }; + + const handleNavigate = (path: string) => { + setCurrentPath(path); + setSelectedFile(null); + setFileContent(null); + }; + + const handleUp = () => { + if (currentPath === "." || currentPath === "") return; + const parts = currentPath.split("/"); + parts.pop(); + const newPath = parts.length === 0 || (parts.length === 1 && parts[0] === "") ? "." : parts.join("/"); + handleNavigate(newPath); + }; + + const handleFileClick = async (file: FileItem) => { + if (file.type === "directory") { + handleNavigate(file.path); + } else { + setSelectedFile(file); + setLoadingContent(true); + setFileContent(null); + + // Check if text or image + const isImage = /\.(jpg|jpeg|png|gif|webp|svg)$/i.test(file.name); + + if (!isImage) { + try { + const { content } = await readFile(file.path); + setFileContent(content); + } catch (err) { + // Binary file or error + setFileContent(null); + } + } + setLoadingContent(false); + } + }; + + if (!isOpen) return null; + + return ( +
+
+ + {/* Header */} +
+
+

Project Artifacts

+
+
+ + {currentPath !== "." && ( + <> + + {currentPath} + + )} +
+
+ +
+ + {/* Content */} +
+ + {/* File List */} +
+ {/* Toolbar */} + + + {loading ? ( +
+ +
+ ) : error ? ( +
+ {error} +
+ ) : files.length === 0 ? ( +
+ Empty directory +
+ ) : ( +
+ {files.map((file) => ( + + ))} +
+ )} +
+ + {/* Preview Pane */} + {selectedFile && ( +
+
+
+ {/\.(jpg|jpeg|png|gif|webp|svg)$/i.test(selectedFile.name) ? ( + + ) : ( + + )} + {selectedFile.name} +
+ + + Download + +
+ +
+ {loadingContent ? ( +
+ +
+ ) : /\.(jpg|jpeg|png|gif|webp|svg)$/i.test(selectedFile.name) ? ( +
+ {selectedFile.name} +
+ ) : fileContent !== null ? ( + 
+                                {fileContent}
+
+ ) : ( +
+

Preview not available for this file type.

+
+ )} +
+
+ )} +
+
+
+ ); +} + +function formatBytes(bytes: number, decimals = 2) { + if (!+bytes) return '0 Bytes'; + const k = 1024; + const dm = decimals < 0 ? 0 : decimals; + const sizes = ['Bytes', 'KB', 'MB', 'GB', 'TB', 'PB', 'EB', 'ZB', 'YB']; + const i = Math.floor(Math.log(bytes) / Math.log(k)); + return `${parseFloat((bytes / Math.pow(k, i)).toFixed(dm))} ${sizes[i]}`; +} diff --git a/frontend/src/components/LabNotebook.tsx b/frontend/src/components/LabNotebook.tsx index 64c0fb0..fdc89b0 100644 --- a/frontend/src/components/LabNotebook.tsx +++ b/frontend/src/components/LabNotebook.tsx @@ -8,6 +8,7 @@ import { ResearchPaper } from "./Notebook/ResearchPaper"; import { cn } from "@/lib/utils"; import { StreamingMarkdown } from "./StreamingMarkdown"; import { CredentialPrompt, CredentialFormState } from "./CredentialPrompt"; +import { ArtifactsBrowser } from "./Artifacts/ArtifactsBrowser"; import { CredentialStatus, fetchCredentialStatus, saveCredentials } from "@/lib/api"; type PendingRun = { @@ -39,6 +40,7 @@ export function LabNotebook() { }); const [selectedModel, setSelectedModel] = useState<"gemini-3-pro-preview" | "claude-opus-4-5">("gemini-3-pro-preview"); const [showCredentialPrompt, setShowCredentialPrompt] = useState(false); + const [showArtifacts, setShowArtifacts] = useState(false); const [pendingRun, setPendingRun] = useState(null); const [isCheckingCredentials, setIsCheckingCredentials] = useState(false); const [isSavingCredentials, setIsSavingCredentials] = useState(false); @@ -169,16 +171,32 @@ export function LabNotebook() { return (
- {/* Fixed API Keys Button - Top Right */} - + {/* Fixed Header Buttons - Top Right */} +
+ + + +
@@ -446,6 +464,11 @@ export function LabNotebook() { isSaving={isSavingCredentials} error={credentialPromptError} /> + + setShowArtifacts(false)} + />
); } diff --git a/frontend/src/lib/api.ts b/frontend/src/lib/api.ts index 3057e7c..bcde6d9 100644 --- a/frontend/src/lib/api.ts +++ b/frontend/src/lib/api.ts @@ -225,3 +225,40 @@ export async function saveCredentials(payload: CredentialUpdatePayload): Promise // Return the new status based on what we just stored + what was already there return fetchCredentialStatus(); } + +// --------------------------------------------------------------------------- +// File API +// --------------------------------------------------------------------------- + +export interface FileItem { + name: string; + path: string; + type: "directory" | "file"; + size: number; + modified: string; +} + +export async function listFiles(path: string = "."): Promise { + const response = await fetch(`${API_BASE_URL}/api/files/list?path=${encodeURIComponent(path)}`); + if (!response.ok) { + throw new Error(`Failed to list files: ${response.statusText}`); + } + return response.json(); +} + +export async function readFile(path: string): Promise<{ content: string }> { + const response = await fetch(`${API_BASE_URL}/api/files/read?path=${encodeURIComponent(path)}`); + if (!response.ok) { + const error = await response.json(); + throw new Error(error.detail || `Failed to read file: ${response.statusText}`); + } + return response.json(); +} + +export function getDownloadUrl(path: string): string { + return `${API_BASE_URL}/api/files/download?path=${encodeURIComponent(path)}`; +} + +export function getZipDownloadUrl(path: string): string { + return `${API_BASE_URL}/api/files/download_zip?path=${encodeURIComponent(path)}`; +} From d75573212a88786e805c54cecb46cbcaa80d41ed Mon Sep 17 00:00:00 2001 From: "google-labs-jules[bot]" <161369871+google-labs-jules[bot]@users.noreply.github.com> Date: Fri, 28 Nov 2025 20:35:07 +0000 Subject: [PATCH 2/7] feat: add file browser and download capability to UI - Added backend endpoints in `api_server.py` for listing, reading, and downloading files. - Added `ArtifactsBrowser` component in frontend to navigate and view local files. - Integrated "Files" button in `LabNotebook` to access the file browser. - Verified backend with Python tests and frontend with Playwright. From 99d9328b6fe05f095602df3dd36d2b75c0247dbe Mon Sep 17 00:00:00 2001 From: "google-labs-jules[bot]" <161369871+google-labs-jules[bot]@users.noreply.github.com> Date: Fri, 28 Nov 2025 21:55:40 +0000 Subject: [PATCH 3/7] fix: ensure files button is always visible and add refresh - Increased z-index of header buttons in `LabNotebook.tsx` to z-[60] to prevent them from being covered by the run header. - Added refresh buttons to `ArtifactsBrowser.tsx` for both the file list and file preview. - Verified fixes with Playwright. --- __pycache__/api_server.cpython-312.pyc | Bin 36911 -> 36911 bytes backend.log | 18 ++-- frontend.log | 5 +- .../components/Artifacts/ArtifactsBrowser.tsx | 87 +++++++++++------- frontend/src/components/LabNotebook.tsx | 2 +- 5 files changed, 69 insertions(+), 43 deletions(-) diff --git a/__pycache__/api_server.cpython-312.pyc b/__pycache__/api_server.cpython-312.pyc index 99e1add305b790fa04271b9556257a4a87cc39f8..942c8b5c696817660232a746d754344844457cd1 100644 GIT binary patch delta 21 bcmZ3#fNA{#Ca%-Gyj%=Gz%I3sOLYPOL+=GG delta 21 bcmZ3#fNA{#Ca%-Gyj%=GAi=hgOLYPOL-7SF diff --git a/backend.log b/backend.log index afb100b..d810b66 100644 --- a/backend.log +++ b/backend.log @@ -1,15 +1,17 @@ INFO: Will watch for changes in these directories: ['/app'] INFO: Uvicorn running on http://0.0.0.0:8000 (Press CTRL+C to quit) -INFO: Started reloader process [7049] using StatReload -INFO: Started server process [7196] +INFO: Started reloader process [8444] using StatReload +INFO: Started server process [8592] INFO: Waiting for application startup. INFO: Application startup complete. -INFO: 127.0.0.1:35952 - "GET /api/health HTTP/1.1" 200 OK -INFO: 127.0.0.1:35954 - "GET /api/credentials/status HTTP/1.1" 200 OK -INFO: 127.0.0.1:35964 - "GET /api/credentials/status HTTP/1.1" 200 OK -INFO: 127.0.0.1:35964 - "GET /api/files/list?path=. HTTP/1.1" 200 OK +INFO: 127.0.0.1:41720 - "GET /api/health HTTP/1.1" 200 OK +INFO: 127.0.0.1:41734 - "GET /api/credentials/status HTTP/1.1" 200 OK +INFO: 127.0.0.1:41736 - "GET /api/credentials/status HTTP/1.1" 200 OK +INFO: 127.0.0.1:41736 - "GET /api/files/list?path=. HTTP/1.1" 200 OK +INFO: 127.0.0.1:41736 - "GET /api/files/list?path=frontend HTTP/1.1" 200 OK +INFO: 127.0.0.1:41736 - "GET /api/files/read?path=frontend%2Fpackage.json HTTP/1.1" 200 OK INFO: Shutting down INFO: Waiting for application shutdown. INFO: Application shutdown complete. -INFO: Finished server process [7196] -INFO: Stopping reloader process [7049] +INFO: Finished server process [8592] +INFO: Stopping reloader process [8444] diff --git a/frontend.log b/frontend.log index ee1435a..8ed84e3 100644 --- a/frontend.log +++ b/frontend.log @@ -4,8 +4,9 @@ Port 5173 is in use, trying another one... Port 5174 is in use, trying another one... +Port 5175 is in use, trying another one... - VITE v7.2.4 ready in 262 ms + VITE v7.2.4 ready in 1266 ms - ➜ Local: http://localhost:5175/ + ➜ Local: http://localhost:5176/ ➜ Network: use --host to expose diff --git a/frontend/src/components/Artifacts/ArtifactsBrowser.tsx b/frontend/src/components/Artifacts/ArtifactsBrowser.tsx index 977cc02..eaa9b6d 100644 --- a/frontend/src/components/Artifacts/ArtifactsBrowser.tsx +++ b/frontend/src/components/Artifacts/ArtifactsBrowser.tsx @@ -1,5 +1,5 @@ import { useState, useEffect } from "react"; -import { X, Loader2, FileText, Folder, Image, Download, ChevronRight, Home, ArrowUp } from "lucide-react"; +import { X, Loader2, FileText, Folder, Image, Download, ChevronRight, Home, ArrowUp, RefreshCw } from "lucide-react"; import { FileItem, listFiles, readFile, getDownloadUrl, getZipDownloadUrl } from "@/lib/api"; import { cn } from "@/lib/utils"; @@ -50,27 +50,31 @@ export function ArtifactsBrowser({ isOpen, onClose }: ArtifactsBrowserProps) { handleNavigate(newPath); }; + const fetchFileContent = async (file: FileItem) => { + setLoadingContent(true); + setFileContent(null); + + // Check if text or image + const isImage = /\.(jpg|jpeg|png|gif|webp|svg)$/i.test(file.name); + + if (!isImage) { + try { + const { content } = await readFile(file.path); + setFileContent(content); + } catch (err) { + // Binary file or error + setFileContent(null); + } + } + setLoadingContent(false); + }; + const handleFileClick = async (file: FileItem) => { if (file.type === "directory") { handleNavigate(file.path); } else { setSelectedFile(file); - setLoadingContent(true); - setFileContent(null); - - // Check if text or image - const isImage = /\.(jpg|jpeg|png|gif|webp|svg)$/i.test(file.name); - - if (!isImage) { - try { - const { content } = await readFile(file.path); - setFileContent(content); - } catch (err) { - // Binary file or error - setFileContent(null); - } - } - setLoadingContent(false); + fetchFileContent(file); } }; @@ -109,13 +113,23 @@ export function ArtifactsBrowser({ isOpen, onClose }: ArtifactsBrowserProps) {
{/* Toolbar */}
- +
+ + +
{selectedFile.name}
- - - Download - +
+ + + + Download + +
diff --git a/frontend/src/components/LabNotebook.tsx b/frontend/src/components/LabNotebook.tsx index fdc89b0..7784d53 100644 --- a/frontend/src/components/LabNotebook.tsx +++ b/frontend/src/components/LabNotebook.tsx @@ -172,7 +172,7 @@ export function LabNotebook() { return (
{/* Fixed Header Buttons - Top Right */} -
+
+ {currentPath !== "." && ( + <> + + {currentPath} + + )} +
+
+ +
+ + {/* Content */} +
+ + {/* File List */} +
+ {/* Toolbar */} + + + {loading ? ( +
+ +
+ ) : error ? ( +
+ {error} +
+ ) : files.length === 0 ? ( +
+ Empty directory +
+ ) : ( +
+ {files.map((file) => ( + + ))} +
+ )} +
+ + {/* Preview Pane */} + {selectedFile && ( +
+
+
+ {/\.(jpg|jpeg|png|gif|webp|svg)$/i.test(selectedFile.name) ? ( + + ) : ( + + )} + {selectedFile.name} +
+
+ + + + Download + +
+
+ +
+ {loadingContent ? ( +
+ +
+ ) : /\.(jpg|jpeg|png|gif|webp|svg)$/i.test(selectedFile.name) ? ( +
+ {selectedFile.name} +
+ ) : fileContent !== null ? ( + 
+                                {fileContent}
+
+ ) : ( +
+

Preview not available for this file type.

+
+ )} +
+
+ )} +
+
+
+ ); +} + +function formatBytes(bytes: number, decimals = 2) { + if (!+bytes) return '0 Bytes'; + const k = 1024; + const dm = decimals < 0 ? 0 : decimals; + const sizes = ['Bytes', 'KB', 'MB', 'GB', 'TB', 'PB', 'EB', 'ZB', 'YB']; + const i = Math.floor(Math.log(bytes) / Math.log(k)); + return `${parseFloat((bytes / Math.pow(k, i)).toFixed(dm))} ${sizes[i]}`; +} diff --git a/frontend/src/components/LabNotebook.tsx b/frontend/src/components/LabNotebook.tsx index 64c0fb0..7784d53 100644 --- a/frontend/src/components/LabNotebook.tsx +++ b/frontend/src/components/LabNotebook.tsx @@ -8,6 +8,7 @@ import { ResearchPaper } from "./Notebook/ResearchPaper"; import { cn } from "@/lib/utils"; import { StreamingMarkdown } from "./StreamingMarkdown"; import { CredentialPrompt, CredentialFormState } from "./CredentialPrompt"; +import { ArtifactsBrowser } from "./Artifacts/ArtifactsBrowser"; import { CredentialStatus, fetchCredentialStatus, saveCredentials } from "@/lib/api"; type PendingRun = { @@ -39,6 +40,7 @@ export function LabNotebook() { }); const [selectedModel, setSelectedModel] = useState<"gemini-3-pro-preview" | "claude-opus-4-5">("gemini-3-pro-preview"); const [showCredentialPrompt, setShowCredentialPrompt] = useState(false); + const [showArtifacts, setShowArtifacts] = useState(false); const [pendingRun, setPendingRun] = useState(null); const [isCheckingCredentials, setIsCheckingCredentials] = useState(false); const [isSavingCredentials, setIsSavingCredentials] = useState(false); @@ -169,16 +171,32 @@ export function LabNotebook() { return (
- {/* Fixed API Keys Button - Top Right */} - + {/* Fixed Header Buttons - Top Right */} +
+ + + +
@@ -446,6 +464,11 @@ export function LabNotebook() { isSaving={isSavingCredentials} error={credentialPromptError} /> + + setShowArtifacts(false)} + />
); } diff --git a/frontend/src/lib/api.ts b/frontend/src/lib/api.ts index 3057e7c..bcde6d9 100644 --- a/frontend/src/lib/api.ts +++ b/frontend/src/lib/api.ts @@ -225,3 +225,40 @@ export async function saveCredentials(payload: CredentialUpdatePayload): Promise // Return the new status based on what we just stored + what was already there return fetchCredentialStatus(); } + +// --------------------------------------------------------------------------- +// File API +// --------------------------------------------------------------------------- + +export interface FileItem { + name: string; + path: string; + type: "directory" | "file"; + size: number; + modified: string; +} + +export async function listFiles(path: string = "."): Promise { + const response = await fetch(`${API_BASE_URL}/api/files/list?path=${encodeURIComponent(path)}`); + if (!response.ok) { + throw new Error(`Failed to list files: ${response.statusText}`); + } + return response.json(); +} + +export async function readFile(path: string): Promise<{ content: string }> { + const response = await fetch(`${API_BASE_URL}/api/files/read?path=${encodeURIComponent(path)}`); + if (!response.ok) { + const error = await response.json(); + throw new Error(error.detail || `Failed to read file: ${response.statusText}`); + } + return response.json(); +} + +export function getDownloadUrl(path: string): string { + return `${API_BASE_URL}/api/files/download?path=${encodeURIComponent(path)}`; +} + +export function getZipDownloadUrl(path: string): string { + return `${API_BASE_URL}/api/files/download_zip?path=${encodeURIComponent(path)}`; +} diff --git a/logger.py b/logger.py index be1f86a..1756784 100644 --- a/logger.py +++ b/logger.py @@ -36,6 +36,13 @@ def setup_logging(): # Global file logger instance logger = setup_logging() +def set_log_file(path): + """Adds a file handler to the global logger.""" + file_handler = logging.FileHandler(path) + file_handler.setLevel(logging.INFO) + file_handler.setFormatter(logging.Formatter("%(asctime)s - %(levelname)s - %(message)s")) + logger.addHandler(file_handler) + def log_step(step_name, status="INFO"): """Logs a step to the file.""" logger.info(f"[{step_name}] {status}") diff --git a/main.py b/main.py index 8c62c91..a33501f 100644 --- a/main.py +++ b/main.py @@ -1,10 +1,13 @@ import os import sys import argparse +import json +from datetime import datetime +from pathlib import Path from dotenv import load_dotenv from agent import run_experiment_loop -from logger import print_status +from logger import print_status, set_log_file def main(): @@ -32,6 +35,12 @@ def main(): "In 'orchestrator' mode: the high-level research task to investigate." ), ) + parser.add_argument( + "--run-dir", + type=str, + default=None, + help="Directory to store run artifacts (agent.log, final paper, etc.).", + ) parser.add_argument( "--gpu", type=str, @@ -88,6 +97,30 @@ def main(): args = parser.parse_args() + # Determine/Create Run Directory + if args.run_dir: + run_dir = Path(args.run_dir) + # If passed by parent process, assume created. If not, create it. + run_dir.mkdir(parents=True, exist_ok=True) + else: + # Generate new run directory for top-level process + task_slug = "".join(x for x in args.task if x.isalnum() or x in " -_").strip().replace(" ", "_")[:50] + timestamp = datetime.now().strftime("%Y%m%d_%H%M%S") + # Change naming convention to _ as requested + run_dir = Path("runs") / f"{task_slug}_{timestamp}" + run_dir.mkdir(parents=True, exist_ok=True) + + # Configure Logger to write to this run directory + set_log_file(run_dir / "agent.log") + + # Save metadata for top-level runs + if not args.run_dir: + try: + with open(run_dir / "metadata.json", "w") as f: + json.dump(vars(args), f, indent=2, default=str) + except Exception as e: + print(f"[WARNING] Failed to save metadata: {e}", file=sys.stderr) + # Preserve existing behavior by default: single agent mode. if args.mode == "single": print_status("Initializing Single Researcher Agent...", "bold cyan") @@ -122,6 +155,7 @@ def main(): max_parallel_experiments=args.max_parallel, test_mode=args.test_mode, model=args.model, + run_dir=run_dir, ) except KeyboardInterrupt: print_status("\nOrchestrated experiment interrupted by user.", "bold red") diff --git a/orchestrator.py b/orchestrator.py index 1f2e2dd..c8cfe54 100644 --- a/orchestrator.py +++ b/orchestrator.py @@ -4,6 +4,7 @@ import subprocess import threading import re +from pathlib import Path from concurrent.futures import ThreadPoolExecutor from typing import List, Optional, Dict, Any @@ -18,6 +19,7 @@ # Global orchestrator state _default_gpu: Optional[str] = None _default_model: str = "gemini-3-pro-preview" +_run_dir: Optional[Path] = None _experiment_counter: int = 0 # Regex for stripping ANSI escape sequences (Rich colour codes, etc.). @@ -287,6 +289,10 @@ def run_researcher(hypothesis: str, gpu: Optional[str] = None, test_mode: bool = if test_mode: cmd.append("--test-mode") + # Pass the run directory to the subprocess so it logs to the same place + if _run_dir: + cmd.extend(["--run-dir", str(_run_dir)]) + print_status( f"[Experiment {experiment_id}] Spawning single-agent process with command: " f"{' '.join(cmd)}", @@ -366,6 +372,16 @@ def _reader(stream, chunks: List[str], is_err: bool) -> None: # UI-only event lines, while leaving CLI / UI behavior untouched. llm_transcript = _clean_transcript_for_llm(transcript) + # Save transcript to file if run_dir is set + if _run_dir: + try: + agents_dir = _run_dir / "agents" + agents_dir.mkdir(parents=True, exist_ok=True) + with open(agents_dir / f"agent_{experiment_id}.txt", "w", encoding="utf-8") as f: + f.write(transcript) + except Exception as e: + logger.error(f"Failed to save transcript for agent {experiment_id}: {e}") + result: Dict[str, Any] = { "experiment_id": experiment_id, "hypothesis": hypothesis, @@ -406,6 +422,7 @@ def run_orchestrator_loop( max_parallel_experiments: int = 2, test_mode: bool = False, model: str = "gemini-3-pro-preview", + run_dir: Optional[Path] = None, ) -> None: """ Main orchestrator loop using Gemini 3 Pro or Claude Opus 4.5 with thinking + manual tool calling. @@ -419,10 +436,12 @@ def run_orchestrator_loop( in a single wave of tool calls. test_mode: If True, runs in test mode with mock data. model: LLM model to use ("gemini-3-pro-preview" or "claude-opus-4-5"). + run_dir: Directory to save artifacts. """ - global _default_gpu, _default_model + global _default_gpu, _default_model, _run_dir _default_gpu = default_gpu _default_model = model + _run_dir = run_dir print_panel( f"Research Task:\n{research_task}", @@ -514,6 +533,14 @@ def run_orchestrator_loop( "Method X is recommended.\n\n" "[DONE]" ) + + if _run_dir: + try: + with open(_run_dir / "final_paper.md", "w", encoding="utf-8") as f: + f.write(final_paper) + except Exception as e: + logger.error(f"Failed to save final paper (test mode): {e}") + print_panel(final_paper, "Final Paper", "bold green") log_step("ORCH_FINAL", "Final paper generated.") emit_event("ORCH_PAPER", {"content": final_paper}) @@ -876,6 +903,14 @@ def _execute_single_call(tool_block): final_text[-1] += delta.text final_paper = "\n\n".join(t for t in final_text if t) + + if _run_dir: + try: + with open(_run_dir / "final_paper.md", "w", encoding="utf-8") as f: + f.write(final_paper) + except Exception as e: + logger.error(f"Failed to save final paper: {e}") + print_panel(final_paper, "Final Paper", "bold green") log_step("ORCH_FINAL", "Final paper generated.") emit_event("ORCH_PAPER", {"content": final_paper}) @@ -1236,6 +1271,13 @@ def _execute_single_call(fn_call) -> Dict[str, Any]: if part.text and not getattr(part, "thought", False): final_text += part.text + if _run_dir: + try: + with open(_run_dir / "final_paper.md", "w", encoding="utf-8") as f: + f.write(final_text) + except Exception as e: + logger.error(f"Failed to save final paper: {e}") + print_panel(final_text, "Final Paper", "bold green") log_step("ORCH_FINAL", "Final paper generated.") emit_event("ORCH_PAPER", {"content": final_text}) From 4081f5304654a5e84c7eb2960ed617faa9b1f564 Mon Sep 17 00:00:00 2001 From: peter milford Date: Fri, 28 Nov 2025 18:39:40 -0800 Subject: [PATCH 5/7] Add .gitignore with common files. Manually remove the files we wanted ignored. --- .gitignore | 28 ++++++++++++++++++++++++++++ 1 file changed, 28 insertions(+) create mode 100644 .gitignore diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..9326a35 --- /dev/null +++ b/.gitignore @@ -0,0 +1,28 @@ +# ignored files +.env +__pycache__/ + +# === Logs === +*.log + +# === Runtime artifacts === +run/ + +# === Python cache === +__pycache__/ +*.py[cod] # for compiled files + +# === Environment variables === +.env +.env.local + +# === Virtual environments (optional) === +venv/ +env/ +.venv/ + +# === IDE / editor files (optional but common) === +.idea/ +.vscode/ +*.swp +*.swo \ No newline at end of file From 99bb7d2f9196b9a212d75d0f50c03b589bda52ec Mon Sep 17 00:00:00 2001 From: peter milford Date: Fri, 28 Nov 2025 18:44:16 -0800 Subject: [PATCH 6/7] Remove files that shouldn't have been tracked. --- __pycache__/agent.cpython-312.pyc | Bin 27700 -> 0 bytes __pycache__/api_server.cpython-312.pyc | Bin 36911 -> 0 bytes __pycache__/insights.cpython-312.pyc | Bin 6745 -> 0 bytes __pycache__/logger.cpython-312.pyc | Bin 2557 -> 0 bytes __pycache__/orchestrator.cpython-312.pyc | Bin 43229 -> 0 bytes agent.log | 44 ----------------------- backend.log | 17 --------- frontend.log | 12 ------- 8 files changed, 73 deletions(-) delete mode 100644 __pycache__/agent.cpython-312.pyc delete mode 100644 __pycache__/api_server.cpython-312.pyc delete mode 100644 __pycache__/insights.cpython-312.pyc delete mode 100644 __pycache__/logger.cpython-312.pyc delete mode 100644 __pycache__/orchestrator.cpython-312.pyc delete mode 100644 agent.log delete mode 100644 backend.log delete mode 100644 frontend.log diff --git a/__pycache__/agent.cpython-312.pyc b/__pycache__/agent.cpython-312.pyc deleted file mode 100644 index f72fe4f2f96d52b787e5db0ae73f6cdadad88573..0000000000000000000000000000000000000000 GIT binary patch literal 0 HcmV?d00001 literal 27700 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Method X applicability -2. Method Y optimization -3. Hyperparameter Z sensitivity -I will launch agents to test these concurrently. -2025-11-29 01:47:40,538 - INFO - [ORCH_EXPERIMENT] Scheduled experiment 1 with GPU=None -2025-11-29 01:47:40,540 - INFO - [ORCH_EXPERIMENT] Scheduled experiment 2 with GPU=None -2025-11-29 01:47:43,289 - INFO - [START] Hypothesis: Hypothesis A: Test Artifacts can be solved by method X. -2025-11-29 01:47:43,292 - INFO - [THOUGHT] I need to verify this hypothesis using a Python script. -I will create a synthetic dataset and run a simple regression model. -Then I will analyze the coefficients to check the relationship. -2025-11-29 01:47:43,317 - INFO - [START] Hypothesis: Hypothesis B: Test Artifacts requires method Y optimization. -2025-11-29 01:47:43,319 - INFO - [THOUGHT] I need to verify this hypothesis using a Python script. -I will create a synthetic dataset and run a simple regression model. -Then I will analyze the coefficients to check the relationship. -2025-11-29 01:47:44,794 - INFO - [TOOL_CALL] execute_in_sandbox({'code': "import numpy as np\nimport pandas as pd\nprint('Generating synthetic data...')\ndata = pd.DataFrame({'x': np.random.rand(100), 'y': np.random.rand(100)})\nprint('Data shape:', data.shape)\nprint('Correlation:', data.corr().iloc[0,1])"}) -2025-11-29 01:47:44,821 - INFO - [TOOL_CALL] execute_in_sandbox({'code': "import numpy as np\nimport pandas as pd\nprint('Generating synthetic data...')\ndata = pd.DataFrame({'x': np.random.rand(100), 'y': np.random.rand(100)})\nprint('Data shape:', data.shape)\nprint('Correlation:', data.corr().iloc[0,1])"}) -2025-11-29 01:47:45,796 - INFO - [TOOL_RESULT] Executed -2025-11-29 01:47:45,823 - INFO - [TOOL_RESULT] Executed -2025-11-29 01:47:47,298 - INFO - [MODEL] The correlation is very low, which suggests no strong linear relationship. -However, since this is mock data, I will conclude based on the hypothesis. -2025-11-29 01:47:47,325 - INFO - [MODEL] The correlation is very low, which suggests no strong linear relationship. -However, since this is mock data, I will conclude based on the hypothesis. -2025-11-29 01:47:48,693 - INFO - [ORCH_EXPERIMENT] Scheduled experiment 3 with GPU=None -2025-11-29 01:47:48,709 - INFO - [ORCH_TOOL_RESULT] run_researcher completed -2025-11-29 01:47:48,744 - INFO - [ORCH_TOOL_RESULT] run_researcher completed -2025-11-29 01:47:51,408 - INFO - [START] Hypothesis: Hypothesis C: Test Artifacts is sensitive to hyperparameter Z. -2025-11-29 01:47:51,411 - INFO - [THOUGHT] I need to verify this hypothesis using a Python script. -I will create a synthetic dataset and run a simple regression model. -Then I will analyze the coefficients to check the relationship. -2025-11-29 01:47:52,913 - INFO - [TOOL_CALL] execute_in_sandbox({'code': "import numpy as np\nimport pandas as pd\nprint('Generating synthetic data...')\ndata = pd.DataFrame({'x': np.random.rand(100), 'y': np.random.rand(100)})\nprint('Data shape:', data.shape)\nprint('Correlation:', data.corr().iloc[0,1])"}) -2025-11-29 01:47:53,916 - INFO - [TOOL_RESULT] Executed -2025-11-29 01:47:55,417 - INFO - [MODEL] The correlation is very low, which suggests no strong linear relationship. -However, since this is mock data, I will conclude based on the hypothesis. -2025-11-29 01:47:56,829 - INFO - [ORCH_TOOL_RESULT] run_researcher completed -2025-11-29 01:47:56,831 - INFO - [ORCH_THOUGHT] The experiments have completed. -Agent A reported success with Method X. -Agent B found Method Y to be unstable. -Agent C confirmed sensitivity to Z. -I have sufficient evidence to write the final paper. -2025-11-29 01:47:58,834 - INFO - [ORCH_FINAL] Final paper generated. diff --git a/backend.log b/backend.log deleted file mode 100644 index d810b66..0000000 --- a/backend.log +++ /dev/null @@ -1,17 +0,0 @@ -INFO: Will watch for changes in these directories: ['/app'] -INFO: Uvicorn running on http://0.0.0.0:8000 (Press CTRL+C to quit) -INFO: Started reloader process [8444] using StatReload -INFO: Started server process [8592] -INFO: Waiting for application startup. -INFO: Application startup complete. -INFO: 127.0.0.1:41720 - "GET /api/health HTTP/1.1" 200 OK -INFO: 127.0.0.1:41734 - "GET /api/credentials/status HTTP/1.1" 200 OK -INFO: 127.0.0.1:41736 - "GET /api/credentials/status HTTP/1.1" 200 OK -INFO: 127.0.0.1:41736 - "GET /api/files/list?path=. HTTP/1.1" 200 OK -INFO: 127.0.0.1:41736 - "GET /api/files/list?path=frontend HTTP/1.1" 200 OK -INFO: 127.0.0.1:41736 - "GET /api/files/read?path=frontend%2Fpackage.json HTTP/1.1" 200 OK -INFO: Shutting down -INFO: Waiting for application shutdown. -INFO: Application shutdown complete. -INFO: Finished server process [8592] -INFO: Stopping reloader process [8444] diff --git a/frontend.log b/frontend.log deleted file mode 100644 index 8ed84e3..0000000 --- a/frontend.log +++ /dev/null @@ -1,12 +0,0 @@ - -> frontend@0.0.0 dev -> vite - -Port 5173 is in use, trying another one... -Port 5174 is in use, trying another one... -Port 5175 is in use, trying another one... - - VITE v7.2.4 ready in 1266 ms - - ➜ Local: http://localhost:5176/ - ➜ Network: use --host to expose From 78e0adea13d0c64157061bc9984242d90d1455df Mon Sep 17 00:00:00 2001 From: "google-labs-jules[bot]" <161369871+google-labs-jules[bot]@users.noreply.github.com> Date: Sat, 29 Nov 2025 20:54:37 +0000 Subject: [PATCH 7/7] Fix: Ensure final paper is saved upon completion - Refactor file saving logic into `_save_final_paper` helper. - Ensure `final_paper.md` is saved when the orchestrator loop terminates successfully with `[DONE]` in both Gemini and Claude loops. - Previously, the file was only saved in the fallback path, causing missing output for successful runs. --- orchestrator.py | 26 ++++++++++++++------------ 1 file changed, 14 insertions(+), 12 deletions(-) diff --git a/orchestrator.py b/orchestrator.py index c8cfe54..6b67884 100644 --- a/orchestrator.py +++ b/orchestrator.py @@ -51,6 +51,16 @@ def _clean_transcript_for_llm(transcript: str) -> str: return "\n".join(cleaned_lines) +def _save_final_paper(content: str) -> None: + """Save the final paper to the run directory.""" + if _run_dir: + try: + with open(_run_dir / "final_paper.md", "w", encoding="utf-8") as f: + f.write(content) + except Exception as e: + logger.error(f"Failed to save final paper: {e}") + + def emit_event(event_type: str, data: Dict[str, Any]) -> None: """Emit a structured event for the frontend.""" # Only emit structured events when explicitly enabled (e.g. via the web API). @@ -715,6 +725,7 @@ def _run_claude_orchestrator_loop( final_content = "\n\n".join(t for t in text_content if t) display_content = final_content.replace("[DONE]", "").strip() if display_content: + _save_final_paper(display_content) print_panel(display_content, "Final Paper", "bold green") log_step("ORCH_FINAL", "Final paper generated (in loop).") emit_event("ORCH_PAPER", {"content": display_content}) @@ -904,12 +915,7 @@ def _execute_single_call(tool_block): final_paper = "\n\n".join(t for t in final_text if t) - if _run_dir: - try: - with open(_run_dir / "final_paper.md", "w", encoding="utf-8") as f: - f.write(final_paper) - except Exception as e: - logger.error(f"Failed to save final paper: {e}") + _save_final_paper(final_paper) print_panel(final_paper, "Final Paper", "bold green") log_step("ORCH_FINAL", "Final paper generated.") @@ -1113,6 +1119,7 @@ def _run_gemini_orchestrator_loop( display_content = final_content.replace("[DONE]", "").strip() if display_content: + _save_final_paper(display_content) print_panel(display_content, "Final Paper", "bold green") log_step("ORCH_FINAL", "Final paper generated (in loop).") emit_event("ORCH_PAPER", {"content": display_content}) @@ -1271,12 +1278,7 @@ def _execute_single_call(fn_call) -> Dict[str, Any]: if part.text and not getattr(part, "thought", False): final_text += part.text - if _run_dir: - try: - with open(_run_dir / "final_paper.md", "w", encoding="utf-8") as f: - f.write(final_text) - except Exception as e: - logger.error(f"Failed to save final paper: {e}") + _save_final_paper(final_text) print_panel(final_text, "Final Paper", "bold green") log_step("ORCH_FINAL", "Final paper generated.")