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<!DOCTYPE html>
<html lang="en">
<head>
<title>Kento Aoyama - Curriculum Vitae</title>
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<article class="resume-wrapper text-center position-relative">
<div class="resume-wrapper-inner mx-auto text-left bg-white shadow-lg">
<header class="resume-header pt-4 pt-md-0">
<div class="media flex-column flex-md-row">
<div class="media-body p-4 d-flex flex-column flex-md-row mx-auto mx-lg-0">
<div class="primary-info">
<h1 class="name mt-0 mb-1 text-white text-uppercase text-uppercase">Kento Aoyama</h1>
<div class="title mb-3">IT Infrastructure Engineer</div>
<ul class="list-unstyled">
<li class="mb-2"><a href="mailto:k.aoyama1127@gmail.com"><i class="fas fa-envelope fa-fw mr-2" data-fa-transform="grow-3"></i>k.aoyama1127@gmail.com</a></li>
<li><a href="https://maps.google.com/maps?q=Tokyo,%20Japan"><i class="fas fa-map-marker-alt fa-fw mr-2" data-fa-transform="grow-6"></i>Tokyo, Japan</a></li>
</ul>
</div><!--//primary-info-->
<div class="secondary-info ml-md-auto mt-2">
<ul class="resume-social list-unstyled">
<li class="mb-3"> </li>
<li class="mb-3"><a href="https://linkedin.com/in/kento-aoyama"><span class="fa-container text-center mr-2"><i class="fab fa-linkedin-in fa-fw"></i></span>linkedin.com/in/kento-aoyama</a></li>
<li class="mb-3"><a href="http://github.com/metaVariable"><span class="fa-container text-center mr-2"><i class="fab fa-github-alt fa-fw"></i></span>github.com/metaVariable</a></li>
</ul>
</div><!--//secondary-info-->
<div class="secondary-info ml-md-auto mt-2">
<ul class="resume-social list-unstyled">
<li class="mb-3">Last updated: September, 16, 2024</li>
<li class="mb-3"><a href="https://speakerdeck.com/metavariable"><span class="fa-container text-center mr-2"><i class="fab fa-speaker-deck"></i></span>speakerdeck.com/metavariable</a></li>
<li class="mb-3"><a href="http://metavariable.hatenablog.com/"><span class="fa-container text-center mr-2"><i class="fas fa-blog"></i></span>blog (Japanese)</a></li>
</ul>
</div><!--//secondary-info-->
</div><!--//media-body-->
</div><!--//media-->
</header>
<div class="resume-body p-5">
<div class="row">
<div class="col-lg-12">
<section class="resume-section experience-section mb-5">
<h2 class="resume-section-title text-uppercase font-weight-bold pb-3 mb-3">Work Experience and Education</h2>
<div class="resume-section-content">
<div class="resume-timeline position-relative">
<article class="resume-timeline-item position-relative">
<div class="resume-timeline-item-header mb-2">
<div class="d-flex flex-column flex-md-row">
<h3 class="resume-position-title font-weight-bold mb-1">IT Infrastructure Engineer</small></h3>
<div class="resume-company-name ml-auto">CyberAgent, Inc.</div>
</div><!--//row-->
<div class="resume-position-time">2022 - Present</div>
</div><!--//resume-timeline-item-header-->
<div class="resume-timeline-item-desc">
<p>Development and operation of the <b>ML Platform</b>, a private machine learning platform on private HPC infrastructure, which provides various MLOps services such as distributed job, inference instance, and Jupyter environments for ML/DS Engineers.</p>
<h4 class="resume-timeline-item-desc-heading font-weight-bold">Achievements:</h4>
<ul class="small">
<li>Private Cloud Meetup #4 (Tokyo, Japan, 2023)</li>
<li>Cloud Operator Days Tokyo 2024 (Tokyo, Japan, 2024)</li>
</ul>
<h4 class="resume-timeline-item-desc-heading font-weight-bold">Technology keywords:</h4>
<ul class="list-inline">
<li class="list-inline-item"><span class="badge badge-primary badge-pill">ML Platform Engineering</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Kubernetes</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">golang</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">grpc</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">GPU/CUDA</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">MPI/NCCL</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">GPU Cluster Management</span></li>
</ul>
</div><!--//resume-timeline-item-desc-->
</article><!--//resume-timeline-item-->
<article class="resume-timeline-item position-relative">
<div class="resume-timeline-item-header mb-2">
<div class="d-flex flex-column flex-md-row">
<h3 class="resume-position-title font-weight-bold mb-1">Researcher</small></h3>
<div class="resume-company-name ml-auto">School of Computing, Tokyo Institute of Technology</div>
</div><!--//row-->
<div class="resume-position-time">2021 - 2022</div>
</div><!--//resume-timeline-item-header-->
</article><!--//resume-timeline-item-->
<article class="resume-timeline-item position-relative pb-5">
<div class="resume-timeline-item-header mb-2">
<div class="d-flex flex-column flex-md-row">
<h3 class="resume-position-title font-weight-bold mb-1">Ph.D. student</h3>
<div class="resume-company-name ml-auto">Department of Computer Science, School of Computing, Tokyo Institute of Technology</div>
</div><!--//row-->
<div class="resume-position-time">2016 - 2021</div>
</div><!--//resume-timeline-item-header-->
<div class="resume-timeline-item-desc">
<p>Research & development of Linux containers for High-Performance Computing applications, and implementation of the parallel/distributed system for bioinformatics software on clouds and supercomputers. (e.g. TSUBAME, ABCI, MS Azure)</p>
<h4 class="resume-timeline-item-desc-heading font-weight-bold">Achievements:</h4>
<p>The research results were presented at academic journals/conferences/tech-reports.</p>
<ul class="small">
<li>Supercomputing Frontiers and Innovations (2020)</li>
<li>Supercomputing Asia 2020 (Singapore, Feb. 2020)</li>
<li>Technical Program in SC19: The International Conference for High Performance Computing, Networking, Storage, and Analysis (Denver, CO, US, Nov. 2019)</li>
<li>The 25th International Conference on Parallel and Distributed Processing Techniques and Application (Las Vegas, NV, US, Jul. 2019)</li>
</ul>
<h4 class="resume-timeline-item-desc-heading font-weight-bold">Technology keywords:</h4>
<ul class="list-inline">
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Linux containers</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Docker</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Singularity</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Shifter/Sarus</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">OCI container</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">OCI image</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">OCI registry</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">MPI/OpenMP</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">CUDA</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Cloud Computing</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Supercomputers</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Bioinformatics</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">HPC Engineering</span></li>
</ul>
</div><!--//resume-timeline-item-desc-->
</article><!--//resume-timeline-item-->
<article class="resume-timeline-item position-relative pb-5">
<div class="resume-timeline-item-header mb-2">
<div class="d-flex flex-column flex-md-row">
<h3 class="resume-position-title font-weight-bold mb-1">Research Internship</h3>
<div class="resume-company-name ml-auto">Swiss National Supercomputing Centre (CSCS), ETH Zurich</div>
</div><!--//row-->
<div class="resume-position-time">2017.9 - 2017.12</div>
</div><!--//resume-timeline-item-header-->
<div class="resume-timeline-item-desc">
<p>Research collaboration with HPC System Integration Group at CSCS. Designing and developing the software architecture of "Shifter-NG" (Next Generation), an open source Linux container for HPC environments. The internal architectural designs were inherited to the new OCI compatible container "Sarus".</p>
<h4 class="resume-timeline-item-desc-heading font-weight-bold">Achievements:</h4>
<p>The research results are used in the production environment of HPC system in CSCS.</p>
<ul class="small">
<li>HPC System at Swiss National Supercomputing Centre.</li>
<li>HPC-AI Advisory Council 2018, 2019.</li>
</ul>
<h4 class="resume-timeline-item-desc-heading font-weight-bold">Technology keywords:</h4>
<ul class="list-inline">
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Python</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">C/C++</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Docker</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Shifter/Sarus</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">OCI image</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">OCI registry</span></li>
</ul>
</div><!--//resume-timeline-item-desc-->
</article><!--//resume-timeline-item-->
<article class="resume-timeline-item position-relative pb-5">
<div class="resume-timeline-item-header mb-2">
<div class="d-flex flex-column flex-md-row">
<h3 class="resume-position-title font-weight-bold mb-1">Software Developper</h3>
<div class="resume-company-name ml-auto">Fujitsu Ltd.</div>
</div><!--//row-->
<div class="resume-position-time">2015 - 2016</div>
</div><!--//resume-timeline-item-header-->
<div class="resume-timeline-item-desc">
<p>R&D for a cloud-integrated application platform service. Development of an Android version of the mobile platform which manages multi-media contents and web-based applications interacting with BaaS (Backend-as-a-Service).</p>
<h4 class="resume-timeline-item-desc-heading font-weight-bold">Technology keywords:</h4>
<ul class="list-inline">
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Java</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">C/C++</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Android</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">CI/CD</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Agile Programming</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">DevOps Engineering</span></li>
</ul>
</div><!--//resume-timeline-item-desc-->
</article><!--//resume-timeline-item-->
<article class="resume-timeline-item position-relative pb-5">
<div class="resume-timeline-item-header mb-2">
<div class="d-flex flex-column flex-md-row">
<h3 class="resume-position-title font-weight-bold mb-1">Master of Engineering</small></h3>
<div class="resume-company-name ml-auto">Department of Computer Science, Graduate School of Information Science and Engineering,<br>Tokyo Institute of Technology</div>
</div><!--//row-->
<div class="resume-position-time">2013 - 2015</div>
</div><!--//resume-timeline-item-header-->
<div class="resume-timeline-item-desc">
<p>Development of a Pipeline for Genome/Exome Analysis on the K computer. The pipeline can perform on over thousands of computing-nodes on the K computer and provides massively parallelized genome/exome sequencing analysis.</p>
<h4 class="resume-timeline-item-desc-heading font-weight-bold">Achievements:</h4>
<p>The research results were presented at academic journal and tech-report.</p>
<ul class="small">
<li>IPSJ Transactions on Advanced Computing System (ACS), 2016.</li>
<li>IPSJ SIG Technical Report (SIGBIO38).</li>
</ul>
<h4 class="resume-timeline-item-desc-heading font-weight-bold">Technology keywords:</h4>
<ul class="list-inline">
<li class="list-inline-item"><span class="badge badge-primary badge-pill">C/C++</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Python</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Java</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">MPI/OpenMP</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Job Scheduling</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Pipeline Development</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">The K computer</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">Bioinformatics</span></li>
<li class="list-inline-item"><span class="badge badge-primary badge-pill">HPC Engineering</span></li>
</ul>
</div><!--//resume-timeline-item-desc-->
</article><!--//resume-timeline-item-->
<article class="resume-timeline-item position-relative">
<div class="resume-timeline-item-header mb-2">
<div class="d-flex flex-column flex-md-row">
<h3 class="resume-position-title font-weight-bold mb-1">Bachelor of Engineering</small></h3>
<div class="resume-company-name ml-auto">Department of Computer Science, Faculty of Electro-Communications,<br>The University of Electro-Communications</div>
</div><!--//row-->
<div class="resume-position-time">2011 - 2013</div>
</div><!--//resume-timeline-item-header-->
</article><!--//resume-timeline-item-->
<article class="resume-timeline-item position-relative">
<div class="resume-timeline-item-header mb-2">
<div class="d-flex flex-column flex-md-row">
<div class="resume-company-name ml-auto">Dept. of Computer Engineering, National Institute of Technology, Toyama College</div>
</div><!--//row-->
<div class="resume-position-time">2006 - 2011</div>
</div><!--//resume-timeline-item-header-->
</article><!--//resume-timeline-item-->
</div><!--//resume-timeline-->
</div>
</section><!--//experience-section-->
<section class="resume-section experience-section mb-5">
<h2 class="resume-section-title text-uppercase font-weight-bold pb-3 mb-3">Publications</h2>
<div class="resume-section-content">
<div class="publication-peer-reviewed">
<h3 class="resume-position-title font-weight-bold mb-1">Peer-reviewed Journal Paper</small></h3>
<ul class="list-unstyled resume-degree-org">
<li class="mb-1">
<b>Kento Aoyama</b>, Masanori Kakuta, Yuri Matsuzaki, Takashi Ishida, Masahito Ohue, Yutaka Akiyama, "Development of Computational Pipeline Software for Genome/Exome Analysis on the K computer", <I>Supercomputing frontiers and innovations</I>, 7(1), 37-54, 2020.
[doi: <a href="http://doi.org/10.14529/jsfi200102">10.14529/jsfi200102</a>]
</li>
<li class="mb-1">
<b>Kento Aoyama</b>, Masanori Kakuta, Yuri Matsuzaki, Takashi Ishida, Masahito Ohue, Yutaka Akiyama, "Development of Exome Analysis Pipeline on the K Computer", <I>IPSJ Transactions on Advanced Computing System(ACS)</I>, 9(2), 15-33, 2016.
[<A href="https://ipsj.ixsq.nii.ac.jp/ej/?action=pages_view_main&active_action=repository_view_main_item_detail&item_id=169433&item_no=1&page_id=13&block_id=8">PDF</A>]
</li>
</ul>
</div><!--//peer-reviewed-->
<div class="publication-peer-reviewed">
<h3 class="resume-position-title font-weight-bold mb-1">Peer-reviewed Conference Paper</small></h3>
<ul class="list-unstyled resume-degree-org">
<li class="mb-1">
<b>Kento Aoyama</b>, Hiroki Watanabe, Masahito Ohue, Yutaka Akiyama, "Multiple HPC Environments-Aware Container Image Configuration Workflow for Large-Scale All-to-All Protein-Protein Docking Calculations", <I>Supercomputing Asia 2020 (SCA'20)</I>, Singapore, Feb. 26, 2020.
[doi: <a href="https://doi.org/10.1007/978-3-030-48842-0_2">10.1007/978-3-030-48842-0_2</a>]
</li>
<li class="mb-1">
<b>Kento Aoyama</b>, Yuki Yamamoto, Ohue Masahito, Yutaka Akiyama, "Performance evaluation of MEGADOCK protein-protein interaction prediction system implemented with distributed containers on a cloud computing environment", <I>The 25th International Conference on Parallel and Distributed Processing Techniques and Application (PDPTA'19)</I>, Las Vegas, Nevada, US, Jul. 29, 2019.
</li>
</ul>
</div><!--//peer-reviewed-->
<div class="publication-without-review">
<h3 class="resume-position-title font-weight-bold mb-1">Conference Paper (without peer-review)</small></h3>
<ul class="list-unstyled resume-degree-org">
<li class="mb-1">
<b>Kento Aoyama</b>, Masahito Ohue, Yutaka Akiyama, "Survey and Performance Comparison of Container Technologies in Bioinformatics Field, <I>IPSJ SIG Technical Report</I>, 2017-BIO-54(47), pp.1-7. 2018.
</li>
<li class="mb-1">
<b>Kento Aoyama</b>, Yuki Yamamoto, Masahito Ohue, Yutaka Akiyama, "Evaluation of Container Virtualized MEGADOCK System in Distributed Computing Environment", <I>IPSJ SIG Technical Report</I>, 2017-BIO-49(3), pp.1-8. 2017.
[<A href="https://speakerdeck.com/metavariable/evaluation-of-container-virtualized-megadock-system-in-distributed-computing-environment">Slide</A>]
</li>
<li class="mb-1">
<b>Kento Aoyama</b>, Masanori Kakuta, Yuri Matsuzaki, Takashi Ishida, Yutaka Akiyama, "Large-scale Parallelization of Exome Analysis Pipeline on K-computer", <I>IPSJ SIG Technical Report</I>, 2014-BIO-38(33), pp.1-7. 2014.
</li>
<li class="mb-1">
<b>Kento Aoyama</b>, Kyouhei Akai, Junichi Akita, Akira Tsukada, "Improvements of the GPU accelerated Simulation for Mach Bands Generation Mechanism in Human Visual System Model", <I>IEEJ Hokuriku Branch</I>, B-5, 2010.
</li>
</ul>
</div><!--//conference-->
<div class="publication-without-review">
<h3 class="resume-position-title font-weight-bold mb-1">Poster Presentation</small></h3>
<ul class="list-unstyled resume-degree-org">
<li class="mb-1">
<b>Kento Aoyama</b>, Hiroki Watanabe, Masahito Ohue, Yutaka Akiyama, "Multiple HPC Environments-Aware Container Image Configuration for Bioinformatics Application", Technical Program (Research Poster) in <I>SC19: The International Conference for High Performance Computing, Networking, Storage, and Analysis</I>, Denver, Colorado, US, Nov. 2019. [<A href="https://sc19.supercomputing.org/presentation/?id=rpost200&sess=sess348">Session</A>]
</li>
<li class="mb-1">
<b>Kento Aoyama</b>, Masahito Ohue, Yutaka Akiyama, "Comparison of the HPC Container Technologies for Bioinformatics Application", <I>Real World Big-Data Computation Open Innovation Laboratory (RWBC-OIL) 1st Workshop</I>, May. 2018.
</li>
<li class="mb-1">
<b>Kento Aoyama</b>, Yuki Yamamoto, Masahito Ohue, Yutaka Akiyama, "Large-Scale Parallelization of Cloud Native PPI-System using Container Virtualization", <I>ACLS International Summer School 2017</I>, Jurong West, Singapore, Sep. 2017.
</li>
<li class="mb-1">
<b>Kento Aoyama</b>, Yuki Yamamoto, Masahito Ohue, Yutaka Akiyama, "High-Performance Protein-Protein Interaction Predictions on Distributed Containerized Environment", <I>High Performance Computing Symposium 2017 (HPCS 2017)</I>, Jun. 2017.
</li>
<li class="mb-1">
<b>Kento Aoyama</b>, Masanori Kakuta, Yuri Matsuzaki, Takashi Ishida, Yutaka Akiyama, "Large-scale Parallelization of Exome Analysis Pipeline on K-computer", <I>ACLS International Summer School 2014</I>, West Lafayette, Indiana, US, Aug. 2014.
</li>
</ul>
</div><!--//poster-->
<div class="oral-presentation">
<h3 class="resume-position-title font-weight-bold mb-1">Oral Presentation</small></h3>
<ul class="list-unstyled resume-degree-org">
<li class="mb-1"></li>
<b>Kento Aoyama</b>, "Introduction of ML Platform, a Machine Learning Platform in CyberAgent, and recent DevOps issues", <I>Private Cloud Meetup #4</I>, Aug. 2023.
</li>
<li class="mb-1"></li>
<b>Kento Aoyama</b>, "Distributed Computing Service and Platform for LLM Development in CyberAgent", <I>Cloud Operator Days Tokyo 2024 (CODT'24)</I>, Closing Keynote, Sep. 2024.
</li>
<li class="mb-1">
<b>Kento Aoyama</b>, Masahito Ohue, Yutaka Akiyama, "Container virtualizations for computational science on HPC environments, <I>Real World Big-Data Computation Open Innovation Laboratory (RWBC-OIL) Annual Meeting 2019</I>, Mar. 2019.
</li>
</ul>
</div><!--//oral-presentation-->
<div class="graduation-thesis">
<h3 class="resume-position-title font-weight-bold mb-1">Graduation Thesis</small></h3>
<ul class="list-unstyled resume-degree-org">
<li class="mb-1">
<b>Large-scale Parallelization of Exome Analysis Pipeline on K-computer</b><br>
Department of Computer Science, Graduate School of Information Science and Engineering, Tokyo Institute of Technology.
</li>
<li class="mb-1">
<b>Large-scale Parallelization of Matrix-matrix Product in Double-double Precision using Fox Algorithm on GPU Cluster</b><br>
Department of Computer Science, Faculty of Electro-Communications, The University of Electro-Communications.
</li>
<li class="mb-1">
<b>Improvements of the GPU accelerated Simulation for Mach Bands Generation Mechanism in Human Visual System Model</b><br>
National Institute of Technology, Toyama College.
</li>
</ul>
</div><!--//graduation-thesis-->
</div>
</section><!--//publication-section-->
</div>
</div><!--//row-->
</div><!--//resume-body-->
</div>
</article>
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