By default, sumrep performs filters on summaries of sequences, e.g. excluding sequences that are out-of-frame or contain a stop codon. We should allow the user to adjust these filters on a summary-by-summary basis. I believe this can be accomplished by providing the ... argument to each summary and passing this into the getColumnSequences call.
By default, sumrep performs filters on summaries of sequences, e.g. excluding sequences that are out-of-frame or contain a stop codon. We should allow the user to adjust these filters on a summary-by-summary basis. I believe this can be accomplished by providing the
...argument to each summary and passing this into thegetColumnSequencescall.