Hi, while I understand pplacer requires a lot of memory because it caches likelihood vectors for all of the internal nodes, I'm still confused why it needs more memory when I try to use more CPUs (only tested on Linux). It looks like when I specify a double number of CPUs, the memory requirements will be also doubled, which doesn't make sense. Anyone knows how to deal with this problem? It really matters when trying to work with a huge reference tree. Thanks.
Hi, while I understand
pplacerrequires a lot of memory because it caches likelihood vectors for all of the internal nodes, I'm still confused why it needs more memory when I try to use more CPUs (only tested on Linux). It looks like when I specify a double number of CPUs, the memory requirements will be also doubled, which doesn't make sense. Anyone knows how to deal with this problem? It really matters when trying to work with a huge reference tree. Thanks.