A recent update to the Matrix package made the following warning surface when I call triangulate() from my own code in package topologyGSA.
It looks like version 1.4-2 does not exist, though. The message should rather mention 1.5-0.
23: warning.(gettextf("as(<%s>, \"%s\") is deprecated since Matrix 1.4-2; do %s instead",
cln1, cln2, deparse1(.as.via.virtual(Class1, Class2, quote(.)))),
call. = FALSE, domain = NA)
22: Matrix.DeprecatedCoerce(cd1, cd2)
21: asMethod(object)
20: as(res, "dgCMatrix")
19: get.adjacency.sparse(graph, type = type, attr = attr, edges = edges,
names = names)
18: igraph::as_adjacency_matrix(as(object, "igraph"))
17: .class1(object)
16: as(igraph::as_adjacency_matrix(as(object, "igraph")), "matrix")
15: g_gn2dm_(from)
14: asMethod(object)
13: as(object, class)
12: coerceGraph(object, "matrix")
11: .generic_triangulation(object, order = order, result = result,
check = check, ..., TRIANG_FUN = triangulateMAT)
10: triangulate.default(moral)
9: triangulate(moral)
8: .processGraph(dag)
7: .procParams(y1, y2, dag)
6: clique.mean.test(y1, y2, dag_bcell, 0.05) at Rex732354ed9de7#9
Hi,
A recent update to the Matrix package made the following warning surface when I call
triangulate()from my own code in packagetopologyGSA.It looks like version 1.4-2 does not exist, though. The message should rather mention 1.5-0.
Below is the full traceback, thanks to CRAN:
Could you please update the
as()call to silence the warning?