The variable "fragment_counts" in line 161 of Data_visualization/archR.R is undefined.
projBulk <- projectBulkATAC(proj_in_tissue, seATAC = fragment_counts, n = 250)
This issue prevents me from successfully running the code.
Hope you can reply. Thanks.
The variable "fragment_counts" in line 161 of Data_visualization/archR.R is undefined.
projBulk <- projectBulkATAC(proj_in_tissue, seATAC = fragment_counts, n = 250)This issue prevents me from successfully running the code.
Hope you can reply. Thanks.