chore(cli): deprecate workflow contract apply in favor of top-level apply (#2887)

Signed-off-by: Sylwester Piskozub <sylwesterpiskozub@gmail.com>

Author: Piskoo

app/cli/cmd/workflow_contract_apply.go

@@ -26,12 +26,10 @@ func newWorkflowContractApplyCmd() *cobra.Command {
 	var contractName string
 
 	cmd := &cobra.Command{
-		Use:   "apply",
-		Short: "Apply a contract (create or update)",
-		Long: `Apply a contract from a file. This command will create the contract if it doesn't exist,
-or update it if it already exists.`,
-		Example: `  # Apply a contract from file
-  chainloop workflow contract apply --contract my-contract.yaml --name my-contract --project my-project`,
+		Use:        "apply",
+		Short:      "Apply a contract (create or update)",
+		Deprecated: "use 'chainloop apply -f <file>' instead",
+		Hidden:     true,
 		PreRunE: func(_ *cobra.Command, _ []string) error {
 			// Validate and extract the contract name
 			var err error

app/cli/documentation/cli-reference.mdx

@@ -3365,52 +3365,6 @@ Options inherited from parent commands
 -y, --yes                       Skip confirmation
 ```
 
-#### chainloop workflow contract apply
-
-Apply a contract (create or update)
-
-Synopsis
-
-Apply a contract from a file. This command will create the contract if it doesn't exist,
-or update it if it already exists.
-
-```
-chainloop workflow contract apply [flags]
-```
-
-Examples
-
-```
-Apply a contract from file
-chainloop workflow contract apply --contract my-contract.yaml --name my-contract --project my-project
-```
-
-Options
-
-```
--f, --contract string      path or URL to the contract schema
---description string   description of the contract
--h, --help                 help for apply
---name string          contract name
---project string       project name used to scope the contract, if not set the contract will be created in the organization
-```
-
-Options inherited from parent commands
-
-```
---artifact-cas string       URL for the Artifacts Content Addressable Storage API ($CHAINLOOP_ARTIFACT_CAS_API) (default "api.cas.chainloop.dev:443")
---artifact-cas-ca string    CUSTOM CA file for the Artifacts CAS API (optional) ($CHAINLOOP_ARTIFACT_CAS_API_CA)
--c, --config string             Path to an existing config file (default is $HOME/.config/chainloop/config.toml)
---control-plane string      URL for the Control Plane API ($CHAINLOOP_CONTROL_PLANE_API) (default "api.cp.chainloop.dev:443")
---control-plane-ca string   CUSTOM CA file for the Control Plane API (optional) ($CHAINLOOP_CONTROL_PLANE_API_CA)
---debug                     Enable debug/verbose logging mode
--i, --insecure                  Skip TLS transport during connection to the control plane ($CHAINLOOP_API_INSECURE)
--n, --org string                organization name
--o, --output string             Output format, valid options are json and table (default "table")
--t, --token string              API token. NOTE: Alternatively use the env variable CHAINLOOP_TOKEN
--y, --yes                       Skip confirmation
-```
-
 #### chainloop workflow contract create
 
 Create a new contract