Thanks your excellent work!!!
I encountered a issue when I run the example (ligand binder with protein motif) in README:
loaded RFDiffusionAA_paper_weights.pt
OVERRIDING: You are changing diffuser.T from the value this model was trained with.
[2025-01-16 21:07:08,867][inference.model_runners][INFO] - Loading checkpoint.
[2025-01-16 21:07:09,175][diffusion][INFO] - Using cached IGSO3.
[2025-01-16 21:07:09,188][main][INFO] - Making design output/ligand_protein_motif/sample_0
[2025-01-16 21:07:09,188][main][INFO] - making design 0 of 0:1
[2025-01-16 21:07:09,188][inference.model_runners][INFO] - Using contig: ['10-120', 'A84-87', '10-120']
Contig string incompatible with --length range
This is my code and I run it on Windows:
python run_inference.py
inference.deterministic=True diffuser.T=200\
inference.output_prefix=output/ligand_protein_motif/sample
inference.input_pdb=input/1haz.pdb
contigmap.contigs=['10-120,A84-87,10-120']
contigmap.length="150-150"
inference.ligand=CYC inference.num_designs=1
inference.design_startnum=0
I hope to get your advice, thank you!
Thanks your excellent work!!!
I encountered a issue when I run the example (ligand binder with protein motif) in README:
loaded RFDiffusionAA_paper_weights.pt
OVERRIDING: You are changing diffuser.T from the value this model was trained with.
[2025-01-16 21:07:08,867][inference.model_runners][INFO] - Loading checkpoint.
[2025-01-16 21:07:09,175][diffusion][INFO] - Using cached IGSO3.
[2025-01-16 21:07:09,188][main][INFO] - Making design output/ligand_protein_motif/sample_0
[2025-01-16 21:07:09,188][main][INFO] - making design 0 of 0:1
[2025-01-16 21:07:09,188][inference.model_runners][INFO] - Using contig: ['10-120', 'A84-87', '10-120']
Contig string incompatible with --length range
This is my code and I run it on Windows:
python run_inference.py
inference.deterministic=True diffuser.T=200\
inference.output_prefix=output/ligand_protein_motif/sample
inference.input_pdb=input/1haz.pdb
contigmap.contigs=['10-120,A84-87,10-120']
contigmap.length="150-150"
inference.ligand=CYC inference.num_designs=1
inference.design_startnum=0
I hope to get your advice, thank you!