Hi I'm trying to run pysam but I keep running into the same error:
Traceback (most recent call last):
File "/home/fuberlin/anaconda3/bin/pysamstats", line 10, in
import pysamstats
File "/home/fuberlin/anaconda3/lib/python3.8/site-packages/pysamstats/init.py", line 8, in
from .pileup import *
File "/home/fuberlin/anaconda3/lib/python3.8/site-packages/pysamstats/pileup.py", line 6, in
import pysamstats.opt as opt
File "pysamstats/opt.pyx", line 1, in init pysamstats.opt
AttributeError: module 'pysam.libcalignmentfile' has no attribute 'IteratorColumnAll'
How can I solve this?
Thanks!
Hi I'm trying to run pysam but I keep running into the same error:
Traceback (most recent call last):
File "/home/fuberlin/anaconda3/bin/pysamstats", line 10, in
import pysamstats
File "/home/fuberlin/anaconda3/lib/python3.8/site-packages/pysamstats/init.py", line 8, in
from .pileup import *
File "/home/fuberlin/anaconda3/lib/python3.8/site-packages/pysamstats/pileup.py", line 6, in
import pysamstats.opt as opt
File "pysamstats/opt.pyx", line 1, in init pysamstats.opt
AttributeError: module 'pysam.libcalignmentfile' has no attribute 'IteratorColumnAll'
How can I solve this?
Thanks!