Dear author, thanks for this great tool!
I would like to ask, can we pass in multiple coordinates at the same time to save running time?
Just like:
import pysam
import pysamstats
mybam = pysam.AlignmentFile('/path/to/your/bamfile.bam')
pysamstats.load_coverage(mybam, chrom='chr1', start=10000, end=20000)
The following operation is used to query the depth of a group of mutations. Is it OK?
mybam = pysam.AlignmentFile('/path/to/your/bamfile.bam')
pysamstats.load_coverage(
mybam,
chrom=['chr1', 'chr2', 'chr3'],
start=[10000, 1500, 1200],
end=[10000, 1500, 1200])
Thanks again.
Dear author, thanks for this great tool!
I would like to ask, can we pass in multiple coordinates at the same time to save running time?
Just like:
The following operation is used to query the depth of a group of mutations. Is it OK?
Thanks again.