In your VGP_decontamination directory, the RELEASE_THE_KRAKEN3.sh script references a database called 'standard_plus_db'. It looks like this would be the standard kraken2 database with some additional data. I'm interested to know what data were used to create this database.
Many thanks!
Cheers,
Emily
In your VGP_decontamination directory, the RELEASE_THE_KRAKEN3.sh script references a database called 'standard_plus_db'. It looks like this would be the standard kraken2 database with some additional data. I'm interested to know what data were used to create this database.
Many thanks!
Cheers,
Emily