pyproject.toml

[build-system]
requires = ["setuptools>=64", "setuptools-scm>=8"]
build-backend = "setuptools.build_meta"

[project]
name = "pyreconstruct"
dynamic = ["version"]
description = "RECONSTRUCT in Python"
readme = "readme.md"
requires-python = ">=3.11,<3.12"
license = { text = "GPL-3.0-or-later" }
authors = [
    { name = "Kristen Harris Lab", email = "michael.chirillo@uri.edu" },
]

# Runtime dependencies mirror requirements.txt (the pins the app is verified
# against). Two deltas are packaging-motivated and documented inline:
#   * opencv-python -> opencv-python-headless: the app uses cv2 only for image
#     processing (no cv2 GUI), and the headless build ships no Qt plugins, which
#     avoids a plugin clash with PySide6 in the frozen build.
#   * certifi: a frozen bundle has no OS trust store, so the stdlib SSL context
#     finds no CA certificates; certifi's cacert.pem is bundled and pointed at
#     by packaging/rthook_ssl.py at launch.
#   * packaging: used for version parsing in modules/constants/repo_info.py.
dependencies = [
    "PySide6==6.5.2",
    "vtk==9.3.1",
    "vedo==2023.4.7",
    "opencv-python-headless==4.8.1.78",
    "numpy==1.24.1",
    "scipy==1.14.1",
    "scikit-image==0.23.2",
    "shapely==2.1.1",
    "trimesh==3.18.1",
    "zarr==2.18.2",
    "numcodecs==0.15.0",
    "cloud-volume==11.0.0",
    "lxml==6.1.0",
    "tifffile==2024.9.20",
    "qdarkstyle==3.2.3",
    "gitpython==3.1.50",
    "certifi",
    "packaging",
]

[project.urls]
Homepage = "https://github.com/SynapseWeb/PyReconstruct"

[project.scripts]
PyReconstruct = "PyReconstruct.cli:main"

[tool.setuptools.packages.find]
include = ["PyReconstruct*"]

[tool.setuptools.package-data]
PyReconstruct = ["assets/**/*", "assets/welcome_series/.welcome/*"]

[tool.setuptools_scm]
# Tag-derived version. Writes PyReconstruct/_version.py at build time so the
# frozen app can read its version without git or installed package metadata.
version_file = "PyReconstruct/_version.py"
fallback_version = "0.0.0+unknown"