From c743dfa35096ea17a98c0d951e7a3af9d0f54df9 Mon Sep 17 00:00:00 2001
From: "Victor C." <98432934+CobV@users.noreply.github.com>
Date: Wed, 4 Sep 2024 12:05:07 -0400
Subject: [PATCH] =?UTF-8?q?The=20label=200=20is=20used=20to=20represent=20?=
 =?UTF-8?q?the=20background.=20So=20for=20the=20organs,=20we=20can=20use?=
 =?UTF-8?q?=20labels=20starting=20from=C2=A01.?=
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---
 preprocess/data_preprocess.py | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/preprocess/data_preprocess.py b/preprocess/data_preprocess.py
index 1852f78..ded4c14 100644
--- a/preprocess/data_preprocess.py
+++ b/preprocess/data_preprocess.py
@@ -668,7 +668,8 @@ def batch_process_cases(in_dir, out_dir):
 
     oars2 = ['lung_l', 'lung_r','spinalcord', 'esophagus', 'heart',  'ptv']    # for DL
     labels2 = dict.fromkeys(oars,0)
-    label_seq = [0, 6, 7, 1, 2, 3, 4, 5, 1]
+    label_seq = [1, 7, 8, 2, 3, 4, 5, 6, 1]
+    #label_seq = [0, 6, 7, 1, 2, 3, 4, 5, 1]
     for w2, key2 in enumerate(oars):
         labels2[key2] = label_seq[w2]        ## labels2 generate full organ mask to caluclate evalution DVHs not for learning