File not found in Vignette

[abiadak]

Dear developer, I've installed protGear using BiocManager and when trying to reproduce the provided example at:

https://www.bioconductor.org/packages/release/bioc/vignettes/protGear/inst/doc/vignette.html

I miss the sample identifiers files, that according to genepix_vars should be located at:

sampleID_path = system.file("extdata/array_sampleID/", package = "protGear"),

That folder doesn't exists and I can't figure out which should be the file names the program searchs and their content. Could you fix it, please?

[Keniajin]

Hi @abiadak thanks, I have made the updates in the devel version. However if the sampleID file is not available or not named exactly as the array file the package automatically generates the sampleID's.