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import argparse
import os
import random
import numpy as np
import torch
import torch.backends.cudnn as cudnn
from trainer import trainer
from model.ParaTransCNN import ParaTransCNN
parser = argparse.ArgumentParser()
parser.add_argument('--train_path', type=str,
default='', help='train root dir for data')
parser.add_argument('--checkpoint_path', type=str,
default='', help='weight root dir for data')
parser.add_argument('--dataset', type=str,
default='Synapse', help='experiment_name')
parser.add_argument('--list_dir', type=str,
default='./lists/lists_Synapse', help='list dir')
parser.add_argument('--num_classes', type=int,
default=9, help='output channel of network')
parser.add_argument('--max_epochs', type=int,
default=150, help='maximum epoch number to train')
parser.add_argument('--batch_size', type=int,
default=4, help='batch_size per gpu')
parser.add_argument('--n_gpu', type=int, default=1, help='total gpu')
parser.add_argument('--deterministic', type=int, default=1,
help='whether use deterministic training')
parser.add_argument('--base_lr', type=float, default=0.01,
help='segmentation network learning rate')
parser.add_argument('--img_size', type=int,
default=224, help='input patch size of network input')
parser.add_argument('--seed', type=int,
default=1234, help='random seed')
parser.add_argument('--model_name', type=str,
default=" ", help='the name of network')
args = parser.parse_args()
if __name__ == "__main__":
if not args.deterministic:
cudnn.benchmark = True
cudnn.deterministic = False
else:
cudnn.benchmark = False
cudnn.deterministic = True
random.seed(args.seed)
np.random.seed(args.seed)
torch.manual_seed(args.seed)
torch.cuda.manual_seed(args.seed)
dataset_name = args.dataset
dataset_config = {
'Synapse': {
"checkpoint_path" : './checkpoints/{}_SGD_{}_{}_{}'.format(args.model_name, args.base_lr,
args.max_epochs, args.dataset),
'list_dir': './lists/lists_Synapse',
'num_classes': 9,
},
'AVT': {
"checkpoint_path" : './checkpoints/{}_SGD_{}_{}_{}'.format(args.model_name, args.base_lr,
args.max_epochs, args.dataset),
'list_dir': './lists/lists_AVT',
'num_classes': 2,
},
}
args.checkpoint_path = dataset_config[dataset_name]['checkpoint_path']
args.list_dir = dataset_config[dataset_name]['list_dir']
args.num_classes = dataset_config[dataset_name]['num_classes']
if not os.path.exists(args.checkpoint_path):
os.makedirs(args.checkpoint_path)
net = ParaTransCNN(num_classes=args.num_classes).cuda()
trainer(args, net)