.classpath

<?xml version="1.0" encoding="UTF-8"?>
<classpath>
	<classpathentry excluding="broad/pda/rnaseq/misc/" kind="src" path="src/java"/>
	<classpathentry kind="lib" path="lib/a_sam-1.48.jar"/>
	<classpathentry kind="lib" path="lib/ATV-3.1.jar"/>
	<classpathentry kind="lib" path="lib/collections-generic-4.01.jar"/>
	<classpathentry kind="lib" path="lib/colt-1.2.0.jar"/>
	<classpathentry kind="lib" path="lib/colt.jar"/>
	<classpathentry kind="lib" path="lib/commons-io-2.1.jar"/>
	<classpathentry kind="lib" path="lib/commons-lang3-3.1.jar"/>
	<classpathentry kind="lib" path="lib/commons-math-2.2.jar"/>
	<classpathentry kind="lib" path="lib/epsgraphics-1.jar"/>
	<classpathentry kind="lib" path="lib/jaligner-1.0-MG.jar"/>
	<classpathentry kind="lib" path="lib/JConnector-5.0.6.jar"/>
	<classpathentry kind="lib" path="lib/jgrapht-jdk1.6.jar"/>
	<classpathentry kind="lib" path="lib/jgraphx.jar"/>
	<classpathentry kind="lib" path="lib/jsc.jar"/>
	<classpathentry kind="lib" path="lib/jung-algorithms-2.0.jar"/>
	<classpathentry kind="lib" path="lib/jung-api-2.0.jar"/>
	<classpathentry kind="lib" path="lib/jung-graph-impl-2.0.jar"/>
	<classpathentry kind="lib" path="lib/jung-visualization-2.0.1.jar"/>
	<classpathentry kind="lib" path="lib/junit-4.4.jar"/>
	<classpathentry kind="lib" path="lib/log4j-1.2.14.jar"/>
	<classpathentry kind="lib" path="lib/picard-1.71.jar"/>
	<classpathentry kind="lib" path="lib/sam-1.71.jar"/>
	<classpathentry kind="lib" path="lib/ssj.jar"/>
	<classpathentry kind="lib" path="lib/tribble-0.1.jar"/>
	<classpathentry kind="lib" path="lib/vcf.jar"/>
	<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER"/>
	<classpathentry kind="lib" path="lib/igv.jar"/>
	<classpathentry kind="output" path="bin"/>
</classpath>