How to merge per-chromosome GDS files converted from BGEN?

[huijie615]

Hi, thanks for your tool! I converted BGEN files to per-chromosome GDS files using gds2bgen. Now I want to merge these GDS files into one. Is there a recommended way to merge per-chromosome GDS files correctly? Thanks!

[zhengxwen]

Please the SeqArray package to merge GDS files:
https://rdrr.io/bioc/SeqArray/man/seqMerge.html
seqMerge()