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Misleading script and bug in the Examples of MPI Parallelization #3

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@eyupsopaci

In the documentation, there are two different MPI run examples (in Section 5.3 MPI-Based Execution (High-Resolution Models) and Section 8. Examples, for MPI parallelization)

One with src/main.py and the other with src/main_mpi.py

For example, in Section 8
mpirun -np 12 python src/main.py -g examples/HF-model/HFmodel.msh -p examples/HF-model/parameter.txt

In this example, src/main.py throws an MPI parallelization error. src/main_mpi.py runs successfully. src/main.py seems to have a bug for MPI parallelization, which I did not thoroughly look at.

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