Some analyses may be very large with 100s or 1000s of samples dramatically increasing wgscovplot runtime and output file size. Chunking up the output into N sized outputs where N is the number of samples per chunk, or allowing user selection of samples of interest would probably be preferable to creating one massive file after waiting a long time for wgscovplot parsing and analysis to complete.
Some analyses may be very large with 100s or 1000s of samples dramatically increasing wgscovplot runtime and output file size. Chunking up the output into N sized outputs where N is the number of samples per chunk, or allowing user selection of samples of interest would probably be preferable to creating one massive file after waiting a long time for wgscovplot parsing and analysis to complete.